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NECEvent2014_4_1_scaffold_72

Alias: 174_001_scaffold_72

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_72_trna_1
unknown

Not on your lists

24..97
DNA (74bp)
transferRNA
NECEvent2014_4_1_scaffold_72_trna_2
unknown

Not on your lists

114..187
DNA (74bp)
transferRNA
NECEvent2014_4_1_scaffold_72_1
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

371..4762
DNA (4392bp) protein (1464aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1419814 species="Bacteria; Firmicu
polC; DNA polymerase III PolC (EC:2.7.7.7) rbh
DNA polymerase III polC-type n=1 Tax=Streptococcus oralis SK100 RepID=I0Q8P1_STROR rbh
NECEvent2014_4_1_scaffold_72_2
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4914..5483
DNA (570bp) protein (190aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Streptococcus sp. M334 RepID=E9FNX7_9STRE rbh
Zn peptidase {ECO:0000313|EMBL:AHZ47023.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
Zn peptidase rbh
NECEvent2014_4_1_scaffold_72_3
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5476..6582
DNA (1107bp) protein (369aa)
FRG domain protein n=1 Tax=Streptococcus sp. M334 RepID=E9FNX8_9STRE rbh
Uncharacterized protein {ECO:0000313|EMBL:AHZ47024.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
hypothetical protein rbh
NECEvent2014_4_1_scaffold_72_4
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6750..7991
DNA (1242bp) protein (414aa)
Aminopeptidase n=1 Tax=Streptococcus oralis (strain Uo5) RepID=F2QGP1_STROU rbh
Peptidase M29 {ECO:0000313|EMBL:AHZ47025.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
peptidase M29 rbh
NECEvent2014_4_1_scaffold_72_5
Streptococcus sp. GMD4S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8001..8231
DNA (231bp) protein (77aa)
Transglycosylase associated protein n=6 Tax=Streptococcus RepID=E6KIZ5_STROR
Uncharacterized protein {ECO:0000313|EMBL:EKA12178.1}; TaxID=1169673 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. GMD4S.;"
membrane protein
NECEvent2014_4_1_scaffold_72_6
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8465..9187
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptoco
Pseudouridine synthase n=1 Tax=Streptococcus sp. C300 RepID=E9FII5_9STRE rbh
16S rRNA pseudouridylate synthase rbh
NECEvent2014_4_1_scaffold_72_7
Streptococcus sp. CM6, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9298..10632
DNA (1335bp) protein (445aa)
Aminopeptidase C {ECO:0000313|EMBL:EUC82567.1}; EC=3.4.22.40 {ECO:0000313|EMBL:EUC82567.1};; TaxID=936580 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" so
Peptidase C1-like family n=1 Tax=Streptococcus oralis ATCC 49296 RepID=E6KIZ3_STROR rbh
aminopeptidase C rbh
NECEvent2014_4_1_scaffold_72_8
Streptococcus sp. CM6, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10797..13025
DNA (2229bp) protein (743aa)
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EUC82564.1}; EC=3.6.3.- {ECO:0000313|EMBL:EUC82564.1};; TaxID=936580 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptoc
Cation-transporting ATPase n=7 Tax=Streptococcus RepID=K1AEU3_9STRE rbh
ATPase rbh
NECEvent2014_4_1_scaffold_72_9
Streptococcus sp. C300, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13085..13996)
DNA (912bp) protein (304aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Streptococcus sp. C300 RepID=E9FII8_9STRE rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EFX56109.1}; TaxID=563036 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" sourc
PTS system mannose family transporter subunit IID rbh
NECEvent2014_4_1_scaffold_72_10
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14011..14823)
DNA (813bp) protein (271aa)
PTS system mannose-specific transporter subunit IIC n=2 Tax=Streptococcus RepID=K1AG94_9STRE rbh
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:KEQ49254.1}; TaxID=1303 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="S
PTS mannose transporter subunit IIC rbh
NECEvent2014_4_1_scaffold_72_11
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14899..15888)
DNA (990bp) protein (330aa)
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:KEQ49255.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEQ49255.1};; TaxID=1303 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcac
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Streptococcus mitis ATCC 6249 RepID=E0PT76_STRMT rbh
PTS system mannost-specific transporter subunits IIAB
NECEvent2014_4_1_scaffold_72_12
unknown

Not on your lists

comp(15991..16158)
DNA (168bp) protein (56aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_72_13
Streptococcus sp. GMD6S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16172..16984)
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Streptococcus RepID=K0ZIN1_9STRE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKA06950.1}; TaxID=1169675 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. GMD6S.;"
HAD family hydrolase
NECEvent2014_4_1_scaffold_72_14
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17172..18590
DNA (1419bp) protein (473aa)
Putative permease n=1 Tax=Streptococcus oralis ATCC 49296 RepID=E6KIY7_STROR rbh
Putative permease {ECO:0000313|EMBL:EFU64114.1}; TaxID=888049 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis ATCC 49296.;"
guanine permease
NECEvent2014_4_1_scaffold_72_15
Streptococcus sp. GMD2S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18644..19351
DNA (708bp) protein (236aa)
CAAX amino terminal protease family protein n=5 Tax=Streptococcus RepID=D4FQX1_STROR rbh
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EKA15526.1}; TaxID=1169671 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococc
CAAX protease
NECEvent2014_4_1_scaffold_72_16
Streptococcus sp. GMD1S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19454..20398
DNA (945bp) protein (315aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=5 Tax=Streptococcus RepID=I0QFE2_STROR rbh
dihydropteroate synthase
NECEvent2014_4_1_scaffold_72_17
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20400..21722
DNA (1323bp) protein (441aa)
Folylpolyglutamate synthase n=1 Tax=Streptococcus oralis (strain Uo5) RepID=F2QGQ3_STROU rbh
Dihydrofolate synthase {ECO:0000313|EMBL:AHZ47037.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
dihydrofolate synthase rbh
NECEvent2014_4_1_scaffold_72_18
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21703..22257
DNA (555bp) protein (185aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=6 Tax=Streptococcus RepID=E6KIY3_STROR rbh
GTP cyclohydrolase
NECEvent2014_4_1_scaffold_72_19
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22416..23237
DNA (822bp) protein (274aa)
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase multi-domain protein n=1 Tax=Streptococcus oralis SK100 RepID=I0Q8P2_STROR rbh
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AHZ47039.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcu
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase rbh
NECEvent2014_4_1_scaffold_72_20
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23230..24513
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Streptococcus RepID=K1AFS4_9STRE rbh
Membrane protein {ECO:0000313|EMBL:AHZ47040.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
membrane protein rbh
NECEvent2014_4_1_scaffold_72_21
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24564..24881)
DNA (318bp) protein (106aa)
Uncharacterized protein n=5 Tax=Streptococcus RepID=D4FQX7_STROR
Uncharacterized protein {ECO:0000313|EMBL:KEQ49264.1}; TaxID=1303 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis.;"
GTP cyclohydrolase
NECEvent2014_4_1_scaffold_72_22
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25086..26096
DNA (1011bp) protein (337aa)
Catabolite control protein A n=11 Tax=Streptococcus RepID=F2QGQ8_STROU rbh
Catabolite control protein A {ECO:0000313|EMBL:EFU64106.1}; TaxID=888049 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis ATCC 4
ccpA; catabolite control protein A
NECEvent2014_4_1_scaffold_72_23
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26149..27111)
DNA (963bp) protein (321aa)
L-asparaginase, type II {ECO:0000313|EMBL:EIC77614.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EIC77614.1};; TaxID=1095740 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
L-asparaginase, type II n=1 Tax=Streptococcus oralis SK100 RepID=I0Q8L2_STROR rbh
asparaginase
NECEvent2014_4_1_scaffold_72_24
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27177..28568
DNA (1392bp) protein (464aa)
Cof-like hydrolase n=1 Tax=Streptococcus oralis SK100 RepID=I0Q8N4_STROR rbh
Cof-like hydrolase {ECO:0000313|EMBL:EIC77636.1}; TaxID=1095740 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis SK100.;"
alanine aminotransferase
NECEvent2014_4_1_scaffold_72_25
Streptococcus sp. GMD4S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29063..31072
DNA (2010bp) protein (670aa)
Cell wall protein n=2 Tax=Streptococcus RepID=K0ZU99_9STRE rbh
Cell wall protein {ECO:0000313|EMBL:EKA11794.1}; TaxID=1169673 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. GMD4S.;"
cell wall protein
NECEvent2014_4_1_scaffold_72_26
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31195..31647)
DNA (453bp) protein (151aa)
Universal stress protein n=4 Tax=Streptococcus RepID=D4FQY3_STROR
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1303 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis.;"
hypothetical protein
NECEvent2014_4_1_scaffold_72_27
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31814..32113
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Streptococcus oralis SK10 RepID=I0QFL5_STROR
Uncharacterized protein {ECO:0000313|EMBL:AHZ47047.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
hypothetical protein
NECEvent2014_4_1_scaffold_72_28
Streptococcus sp. C300, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32257..33471
DNA (1215bp) protein (405aa)
aminotransferase (EC:2.6.1.2)
Putative aminotransferase AlaT n=1 Tax=Streptococcus sp. C300 RepID=E9FIK6_9STRE rbh
Putative aminotransferase AlaT {ECO:0000313|EMBL:EFX56127.1}; TaxID=563036 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. C300.;"
Displaying items 1-30 of 79 in total

View Taxonomy