ggKbase home page

NECEvent2014_4_1_scaffold_91

Alias: 174_001_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_91_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

493..1224
DNA (732bp) protein (244aa)
Allophanate hydrolase subunit 1 (EC:3.5.1.54)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q8CSB4_STAES rbh
Allophanate hydrolase subunit 1 {ECO:0000313|EMBL:ETJ12145.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_4_1_scaffold_91_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1214..2218
DNA (1005bp) protein (335aa)
Urea amidolyase-related protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HNU3_STAEQ rbh
Biotin-dependent carboxylase domain protein {ECO:0000313|EMBL:EFE59574.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:
hypothetical protein
NECEvent2014_4_1_scaffold_91_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2219..2659
DNA (441bp) protein (147aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative n=51 Tax=Staphylococcus epidermidis RepID=Q5HNU4_STAEQ
Putative acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EFE59575.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
Biotin carboxyl carrier protein
NECEvent2014_4_1_scaffold_91_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2670..4031
DNA (1362bp) protein (454aa)
Acetyl-CoA carboxylase, biotin carboxylase, putative n=34 Tax=Staphylococcus epidermidis RepID=Q5HNU5_STAEQ rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:ETJ12142.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
acetyl-CoA carboxylase, biotin carboxylase
NECEvent2014_4_1_scaffold_91_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4028..4786
DNA (759bp) protein (253aa)
UPF0271 protein SERP1168 n=7 Tax=Staphylococcus epidermidis RepID=Y1168_STAEQ rbh
UPF0271 protein HMPREF0794_0398 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
LamB/YcsF family protein
NECEvent2014_4_1_scaffold_91_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4798..6042
DNA (1245bp) protein (415aa)
Uncharacterized protein n=34 Tax=Staphylococcus epidermidis RepID=Q5HNU7_STAEQ rbh
Branched chain amino acids transporter {ECO:0000313|EMBL:ETJ12140.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
natural resistance-associated macrophage family protein
NECEvent2014_4_1_scaffold_91_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6241..6927
DNA (687bp) protein (229aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=48 Tax=Staphylococcus epidermidis RepID=MTNN_STAEQ rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000255|HAMAP-Rule:MF_01684}; Short=MTA/SAH nucleosidase {ECO:0000255|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000255|HAMAP-Rule:MF_01684
mtn; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
NECEvent2014_4_1_scaffold_91_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6947..7474
DNA (528bp) protein (176aa)
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EFE59580.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFE59580.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
Hydrolase, HAD-superfamily, subfamily IIIA n=47 Tax=Staphylococcus epidermidis RepID=Q5HNU9_STAEQ rbh
FIG001553: Hydrolase, HAD subfamily IIIA
NECEvent2014_4_1_scaffold_91_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7475..8575
DNA (1101bp) protein (367aa)
GTP-binding protein, putative n=66 Tax=Staphylococcus epidermidis RepID=Q5HNV0_STAEQ rbh
Ribosome biogenesis GTPase YqeH {ECO:0000313|EMBL:EFE59581.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
GTP-binding protein YqeH, possibly involved in replication initiation
NECEvent2014_4_1_scaffold_91_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8591..9400
DNA (810bp) protein (270aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=176280 species="Bacteria; Firmi
Shikimate dehydrogenase n=22 Tax=Staphylococcus epidermidis RepID=AROE_STAEQ rbh
shikimate dehydrogenease
NECEvent2014_4_1_scaffold_91_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9400..9693
DNA (294bp) protein (98aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HNV2_STAEQ
RNA binding protein {ECO:0000313|EMBL:ETJ12135.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
hypothetical protein
NECEvent2014_4_1_scaffold_91_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9690..10265
DNA (576bp) protein (192aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Nicotinate-nucleotide adenylyltransferase ## bacterial NadD family (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=42 Tax=Staphylococcus epidermidis RepID=NADD_STAEQ rbh
NECEvent2014_4_1_scaffold_91_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10252..10836
DNA (585bp) protein (195aa)
Uncharacterized protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HNV4_STAEQ rbh
Uncharacterized protein {ECO:0000313|EMBL:AAW54501.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Hydrolase (HAD superfamily), YqeK
NECEvent2014_4_1_scaffold_91_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10837..11190
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=54 Tax=Staphylococcus epidermidis RepID=Q8CSC3_STAES
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
hypothetical protein
NECEvent2014_4_1_scaffold_91_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11193..11912
DNA (720bp) protein (240aa)
FIG145533: Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5 (EC:2.1.1.-)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HNV6_STAEQ rbh
Methionine biosynthesis protein MetW-like protein {ECO:0000313|EMBL:ETJ12131.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_2
NECEvent2014_4_1_scaffold_91_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11971..12645
DNA (675bp) protein (225aa)
ComEA protein n=15 Tax=Staphylococcus epidermidis RepID=C5Q9L3_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ12130.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
competence ComEA helix-hairpin-helix repeat region domain protein
NECEvent2014_4_1_scaffold_91_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12725..13186
DNA (462bp) protein (154aa)
ComE operon protein 2 n=36 Tax=Staphylococcus epidermidis RepID=Q5HNV8_STAEQ rbh
ComE operon protein 2 {ECO:0000313|EMBL:AAW54497.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;
competence protein ComE
NECEvent2014_4_1_scaffold_91_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13190..15406
DNA (2217bp) protein (739aa)
DNA internalization competence protein ComEC/Rec2-like protein n=18 Tax=Staphylococcus epidermidis RepID=F9LBR0_STAEP rbh
Competence protein ComEC/Rec2, putative {ECO:0000313|EMBL:AAW54496.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATC
competence protein ComEC
NECEvent2014_4_1_scaffold_91_19

Not on your lists

15451..16425
DNA (975bp) protein (325aa)
holA; DNA polymerase III, delta subunit (EC:2.7.7.7)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HNW0_STAEQ rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:ETJ18603.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_4_1_scaffold_91_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(16543..16794)
DNA (252bp) protein (84aa)
30S ribosomal protein S20 n=80 Tax=Staphylococcus epidermidis RepID=RS20_STAEQ
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
SSU ribosomal protein S20p
NECEvent2014_4_1_scaffold_91_21

Not on your lists

16991..18910
DNA (1920bp) protein (640aa)
Elongation factor 4 n=20 Tax=Staphylococcus epidermidis RepID=C5QXJ2_STAEP rbh
Elongation factor 4 {ECO:0000313|EMBL:ETJ18605.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Translation elongation factor LepA
NECEvent2014_4_1_scaffold_91_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19029..20153
DNA (1125bp) protein (375aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFE59594.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFE59594.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales;
Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent , in heat shock gene cluster (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase, putative n=39 Tax=Staphylococcus epidermidis RepID=Q5HNW3_STAEQ rbh
NECEvent2014_4_1_scaffold_91_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20253..21230
DNA (978bp) protein (326aa)
Heat-inducible transcription repressor HrcA n=53 Tax=Staphylococcus epidermidis RepID=HRCA_STAEQ rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
Heat-inducible transcription repressor HrcA
NECEvent2014_4_1_scaffold_91_24

Not on your lists

21259..21891
DNA (633bp) protein (211aa)
Protein GrpE n=44 Tax=Staphylococcus epidermidis RepID=GRPE_STAEQ rbh
Protein grpE {ECO:0000313|EMBL:ETJ18608.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Heat shock protein GrpE
NECEvent2014_4_1_scaffold_91_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21947..23776
DNA (1830bp) protein (610aa)
Chaperone protein DnaK n=46 Tax=Staphylococcus epidermidis RepID=DNAK_STAEQ rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
NECEvent2014_4_1_scaffold_91_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23921..25042
DNA (1122bp) protein (374aa)
Chaperone protein DnaJ n=37 Tax=Staphylococcus epidermidis RepID=C5Q9K3_STAEP rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epide
Chaperone protein DnaJ
NECEvent2014_4_1_scaffold_91_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25046..25984
DNA (939bp) protein (313aa)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=176279 species="Bact
Ribosomal protein L11 methyltransferase n=30 Tax=Staphylococcus epidermidis RepID=PRMA_STAEQ rbh
prmA; ribosomal protein L11 methyltransferase
NECEvent2014_4_1_scaffold_91_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26001..26738
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyl
Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=21 Tax=Staphylococcus epidermidis RepID=Q5HNW9_STAEQ rbh
NECEvent2014_4_1_scaffold_91_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26744..28090
DNA (1347bp) protein (449aa)
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFE59601.1}; EC=1.8.-.- {ECO:0000313|EMBL:EFE59601.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
Uncharacterized protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HNX0_STAEQ rbh
hypothetical protein
NECEvent2014_4_1_scaffold_91_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28216..28392
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=34 Tax=Staphylococcus aureus RepID=I0C4T7_STAA5
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
rpsU; 30S ribosomal protein S21
Displaying items 1-30 of 71 in total

View Taxonomy