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NECEvent2014_4_1_scaffold_106

Alias: 174_001_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_106_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..1336)
DNA (1335bp) protein (445aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococ
putative DEAD-box ATP-dependent RNA helicase
NECEvent2014_4_1_scaffold_106_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1637..2992)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillale
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopim elate--D-alanyl-D-alanyl ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Staphylococcus epidermidis VCU071 RepID=H0DRM3_STAEP rbh
NECEvent2014_4_1_scaffold_106_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3004..4077)
DNA (1074bp) protein (358aa)
D-alanine--D-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase n=30 Tax=Staphylococcus epidermidis RepID=DDL_STAES rbh
NECEvent2014_4_1_scaffold_106_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4468..5679
DNA (1212bp) protein (404aa)
Cell cycle protein FtsW n=20 Tax=Staphylococcus epidermidis RepID=K1UP13_STAEP rbh
Cell division protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:AAW55061.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (stra
Cell division protein FtsW
NECEvent2014_4_1_scaffold_106_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5779..5916)
DNA (138bp) protein (46aa)
Uncharacterized protein n=66 Tax=Staphylococcus epidermidis RepID=Q5HMD6_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:ESV20206.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
NECEvent2014_4_1_scaffold_106_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6059..6268)
DNA (210bp) protein (70aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=Q5HMD5_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:AAW55063.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Hypothetical protein SAV2086
NECEvent2014_4_1_scaffold_106_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6275..6568)
DNA (294bp) protein (98aa)
Uncharacterized protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HMD4_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:AAW55064.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
hypothetical protein
NECEvent2014_4_1_scaffold_106_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6742..8226
DNA (1485bp) protein (495aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=525375 species="Bacteria; Firmicutes;
Cardiolipin synthetase (EC:2.7.8.-)
Cardiolipin synthase n=8 Tax=Staphylococcus epidermidis RepID=C5QD03_STAEP rbh
NECEvent2014_4_1_scaffold_106_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8408..9061
DNA (654bp) protein (218aa)
HD domain protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HMD2_STAEQ rbh
HD domain protein {ECO:0000313|EMBL:AAW55066.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
metal-dependent phosphohydrolase
NECEvent2014_4_1_scaffold_106_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9167..10084)
DNA (918bp) protein (306aa)
Membrane protein insertase YidC n=7 Tax=Staphylococcus epidermidis RepID=C5QD01_STAEP rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01811}; Membrane protein YidC {ECO
lipoprotein
NECEvent2014_4_1_scaffold_106_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10128..10775)
DNA (648bp) protein (216aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamin-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Staphylococcus epidermidis NIHLM040 RepID=J0ZJM9_STAEP rbh
NECEvent2014_4_1_scaffold_106_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10772..11563)
DNA (792bp) protein (264aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethy
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=32 Tax=Staphylococcus epidermidis RepID=THIM_STAEQ rbh
NECEvent2014_4_1_scaffold_106_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11553..12404)
DNA (852bp) protein (284aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EFE60139.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EFE60139.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=22 Tax=Staphylococcus epidermidis RepID=C5QTN3_STAEP rbh
NECEvent2014_4_1_scaffold_106_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12367..13056)
DNA (690bp) protein (230aa)
Putative thiaminase-2 n=46 Tax=Staphylococcus epidermidis RepID=TENA_STAEQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ12884.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
TenA family transcription regulator
NECEvent2014_4_1_scaffold_106_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13340..13999)
DNA (660bp) protein (220aa)
Putative transglycosylase SceD {ECO:0000313|EMBL:EFE60141.1}; EC=3.2.-.- {ECO:0000313|EMBL:EFE60141.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Probable transglycosylase SceD n=51 Tax=Staphylococcus epidermidis RepID=SCED_STAEQ rbh
SceD-like transglycosylase, biomarker for vancomycin-intermediate strains
NECEvent2014_4_1_scaffold_106_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14387..14782)
DNA (396bp) protein (132aa)
Single-stranded DNA-binding protein n=40 Tax=Staphylococcus epidermidis RepID=SSB_STAES
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli;
single strand DNA binding protein
NECEvent2014_4_1_scaffold_106_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14973..15413
DNA (441bp) protein (147aa)
YwpF protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HMC4_STAEQ
YwpF protein {ECO:0000313|EMBL:AAW55082.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
ywpF; hypothetical protein
NECEvent2014_4_1_scaffold_106_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15731..16168)
DNA (438bp) protein (146aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=54 Tax=Staphylococcus epidermidis RepID=FABZ_STAEQ
NECEvent2014_4_1_scaffold_106_19
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16202..17467)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 n=41 Tax=Staphylococcus epidermidis RepID=MURA1_STAEQ rbh
NECEvent2014_4_1_scaffold_106_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17577..17810)
DNA (234bp) protein (78aa)
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMC1_STAEQ
Putative membrane protein {ECO:0000313|EMBL:EFE60146.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
NECEvent2014_4_1_scaffold_106_21
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17959..18363)
DNA (405bp) protein (135aa)
ATP synthase epsilon chain (EC:3.6.3.14)
ATP synthase epsilon chain n=19 Tax=Staphylococcus epidermidis RepID=ATPE_STAEQ
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
NECEvent2014_4_1_scaffold_106_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18383..19795)
DNA (1413bp) protein (471aa)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=54 Tax=Staphylococcus epidermidis RepID=ATPB_STAEQ rbh
NECEvent2014_4_1_scaffold_106_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19817..20683)
DNA (867bp) protein (289aa)
ATP synthase gamma chain (EC:3.6.3.14)
ATP synthase gamma chain n=46 Tax=Staphylococcus epidermidis RepID=ATPG_STAEQ rbh
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=1762
NECEvent2014_4_1_scaffold_106_24
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20768..22279)
DNA (1512bp) protein (504aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase alpha chain (EC:3.6.3.14)
ATP synthase subunit alpha n=50 Tax=Staphylococcus epidermidis RepID=ATPA_STAEQ rbh
NECEvent2014_4_1_scaffold_106_25
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22302..22841)
DNA (540bp) protein (180aa)
ATP synthase delta chain (EC:3.6.3.14)
ATP synthase subunit delta n=48 Tax=Staphylococcus epidermidis RepID=ATPD_STAEQ rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
NECEvent2014_4_1_scaffold_106_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22841..23356)
DNA (516bp) protein (172aa)
ATP synthase B chain (EC:3.6.3.14)
ATP synthase subunit b n=35 Tax=Staphylococcus epidermidis RepID=ATPF_STAEQ rbh
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
NECEvent2014_4_1_scaffold_106_27
Staphylococcus argenteus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23454..23666)
DNA (213bp) protein (71aa)
ATP synthase subunit c n=509 Tax=Staphylococcus RepID=ATPL_STAA1
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779, ECO:0000313|EMBL:CCE59764.1}; TaxID=985002 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus argenteus
atpE; ATP synthase subunit c
NECEvent2014_4_1_scaffold_106_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23709..24437)
DNA (729bp) protein (243aa)
ATP synthase A chain (EC:3.6.3.14)
ATP synthase subunit a n=76 Tax=Staphylococcus epidermidis RepID=ATP6_STAEQ rbh
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; TaxID=176280 species
NECEvent2014_4_1_scaffold_106_29
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24463..24912)
DNA (450bp) protein (150aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=F9INF8_ACIBA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ13757.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
ATP synthase I chain family protein
NECEvent2014_4_1_scaffold_106_30
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24966..26111)
DNA (1146bp) protein (382aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=41 Tax=Staphylococcus epidermidis RepID=Q8CNJ0_STAES rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ETJ13756.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Displaying items 1-30 of 58 in total

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