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NECEvent2014_4_1_scaffold_177

Alias: 174_001_scaffold_177

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_177_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..408
DNA (408bp) protein (136aa)
Serine-rich adhesin for platelets family protein n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0NSX5_STAEP
Serine threonine rich antigen {ECO:0000313|EMBL:AAW53156.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 /
serine threonine rich antigen
NECEvent2014_4_1_scaffold_177_2
unknown

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465..608
DNA (144bp) protein (48aa)

This feature has no annotations

NECEvent2014_4_1_scaffold_177_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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551..1750
DNA (1200bp) protein (400aa)
Accessory Sec system protein translocase subunit SecY2 n=51 Tax=Staphylococcus epidermidis RepID=SECY2_STAES rbh
Accessory Sec system protein translocase subunit SecY2 {ECO:0000256|HAMAP-Rule:MF_01466}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epid
secY2; accessory Sec system translocase SecY2
NECEvent2014_4_1_scaffold_177_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1768..3324
DNA (1557bp) protein (519aa)
Accessory Sec system protein Asp1 n=16 Tax=Staphylococcus epidermidis RepID=C5QBD0_STAEP rbh
Accessory Sec system protein Asp1 {ECO:0000313|EMBL:EFE58904.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;
Accessory secretory protein Asp1
NECEvent2014_4_1_scaffold_177_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3305..4873
DNA (1569bp) protein (523aa)
Accessory Sec system protein Asp2 n=9 Tax=Staphylococcus epidermidis RepID=D4FL96_STAEP rbh
Accessory Sec system protein Asp2 {ECO:0000313|EMBL:EFE58903.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;
hypothetical protein
NECEvent2014_4_1_scaffold_177_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4860..5432
DNA (573bp) protein (191aa)
Accessory Sec system protein Asp3 n=8 Tax=Staphylococcus epidermidis RepID=F3SZI3_STAEP rbh
Accessory Sec system protein Asp3 {ECO:0000313|EMBL:EFE58902.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;
Accessory secretory protein Asp3
NECEvent2014_4_1_scaffold_177_7

Not on your lists

5425..7815
DNA (2391bp) protein (797aa)
Protein translocase subunit SecA 2 n=22 Tax=Staphylococcus epidermidis RepID=SECA2_STAEQ rbh
Protein translocase subunit SecA 2 {ECO:0000313|EMBL:ETJ20869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein export cytoplasm protein SecA2 ATPase RNA helicase (TC 3.A.5.1.1)
NECEvent2014_4_1_scaffold_177_8

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7833..9341
DNA (1509bp) protein (503aa)
Glycosyltransferase Gtf1 n=35 Tax=Staphylococcus epidermidis RepID=D4FL93_STAEP rbh
Glycosyltransferase {ECO:0000313|EMBL:ETJ20870.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Lipopolysaccharide biosynthesis protein rbh
NECEvent2014_4_1_scaffold_177_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9334..10674
DNA (1341bp) protein (447aa)
Glycosyltransferase stabilizing protein Gtf2 n=16 Tax=Staphylococcus epidermidis RepID=F9LIU2_STAEP rbh
Glycosyltransferase stabilizing protein Gtf2 {ECO:0000256|HAMAP-Rule:MF_01473}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M2
gtfB; accessory Sec system glycosyltransferase GtfB rbh
NECEvent2014_4_1_scaffold_177_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10780..11127
DNA (348bp) protein (116aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q8CQW7_STAES
Uncharacterized protein {ECO:0000313|EMBL:EFE58898.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
NECEvent2014_4_1_scaffold_177_11

Not on your lists

11297..11776
DNA (480bp) protein (160aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=25 Tax=Staphylococcus epidermidis RepID=Q5HKS0_STAEQ rbh
Peptide methionine sulfoxide reductase MsrA 3 {ECO:0000313|EMBL:ETJ20873.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_4_1_scaffold_177_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11924..12280)
DNA (357bp) protein (119aa)
Uncharacterized protein n=32 Tax=Staphylococcus epidermidis RepID=Q5HKS1_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:AAW53140.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
hypothetical protein
NECEvent2014_4_1_scaffold_177_13

Not on your lists

12621..13793
DNA (1173bp) protein (391aa)
Transporter, major facilitator family protein n=16 Tax=Staphylococcus epidermidis RepID=F9LIT8_STAEP rbh
Major facilitator transporter {ECO:0000313|EMBL:ETJ20875.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sugar (and other) transporter family protein
NECEvent2014_4_1_scaffold_177_14

Not on your lists

13955..14644
DNA (690bp) protein (230aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=F3SZJ1_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ20876.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_177_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15039..15194
DNA (156bp) protein (52aa)
IS1272, transposase n=1 Tax=Staphylococcus epidermidis NIHLM021 RepID=J0QF42_STAEP
IS1272, transposase {ECO:0000313|EMBL:EFE58893.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
truncated transposase
NECEvent2014_4_1_scaffold_177_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15393..15569)
DNA (177bp) protein (59aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HKS5_STAEQ
Membrane protein {ECO:0000313|EMBL:ESV19573.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
NECEvent2014_4_1_scaffold_177_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15883..16311)
DNA (429bp) protein (143aa)
Organic hydroperoxide resistance protein-like 2 n=51 Tax=Staphylococcus epidermidis RepID=OHRL2_STAES
Organic hydroperoxide resistance protein-like 2; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
general stress protein 170
NECEvent2014_4_1_scaffold_177_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16561..18591
DNA (2031bp) protein (677aa)
Uncharacterized protein n=27 Tax=Staphylococcus epidermidis RepID=Q8CQX2_STAES rbh
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFE58889.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:
hypothetical protein
NECEvent2014_4_1_scaffold_177_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18959..20926)
DNA (1968bp) protein (656aa)
Autolysin n=22 Tax=Staphylococcus epidermidis RepID=Q8CMK0_STAES rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFE58888.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_4_1_scaffold_177_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21214..24072
DNA (2859bp) protein (953aa)
YhgE/Pip C-terminal domain protein n=6 Tax=Staphylococcus epidermidis RepID=H3W0K2_STAEP rbh
YhgE/Pip domain protein {ECO:0000313|EMBL:EFE58887.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Phage infection protein
NECEvent2014_4_1_scaffold_177_21

Not on your lists

comp(24383..25333)
DNA (951bp) protein (317aa)
manA-2; mannose-6-phosphate isomerase (EC:5.3.1.8)
Phosphomannose isomerase type I n=4 Tax=Staphylococcus epidermidis RepID=H3W0K1_STAEP rbh
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ETJ18451.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_4_1_scaffold_177_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25349..27289)
DNA (1941bp) protein (647aa)
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
PTS system mannose-specific EIIBCA component n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0K5C4_STAEP rbh
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFE58885.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_4_1_scaffold_177_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27374..29245)
DNA (1872bp) protein (624aa)
Transcriptional antiterminator, BglG family n=22 Tax=Staphylococcus epidermidis RepID=Q5HKT3_STAEQ rbh
HTH domain protein {ECO:0000313|EMBL:EFE58884.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Activator of the mannose operon (transcriptional antiterminator), BglG family
NECEvent2014_4_1_scaffold_177_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29563..29697)
DNA (135bp) protein (45aa)
Hemolysin, putative n=77 Tax=Staphylococcus epidermidis RepID=Q5HKT4_STAEQ
Hemolysin {ECO:0000313|EMBL:ESV19581.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
NECEvent2014_4_1_scaffold_177_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29993..30775
DNA (783bp) protein (261aa)
Diacetyl reductase n=2 Tax=Staphylococcus epidermidis RepID=K8P055_STAEP rbh
Acetoin reductase {ECO:0000313|EMBL:EES35323.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
acetoin reductase
NECEvent2014_4_1_scaffold_177_26

Not on your lists

comp(30932..31048)
DNA (117bp) protein (39aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ16288.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 26 items

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