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NECEvent2014_4_1_scaffold_231

Alias: 174_001_scaffold_231

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_231_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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78..875
DNA (798bp) protein (266aa)
Uncharacterized protein n=41 Tax=Staphylococcus epidermidis RepID=Q8CSX0_STAES rbh
Glyoxalase family protein {ECO:0000313|EMBL:EFE59512.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Predicted ring-cleavage extradiol dioxygenase
NECEvent2014_4_1_scaffold_231_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

880..1350
DNA (471bp) protein (157aa)
CHAP domain protein n=15 Tax=Staphylococcus epidermidis RepID=C5Q8I2_STAEP rbh
CHAP domain protein {ECO:0000313|EMBL:EFE59511.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
secretory antigen SsaA
NECEvent2014_4_1_scaffold_231_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1391..1924
DNA (534bp) protein (178aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=9 Tax=Staphylococcus epidermidis RepID=C5Q8I3_STAEP rbh
NECEvent2014_4_1_scaffold_231_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1927..2844
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
Pseudouridine synthase n=48 Tax=Staphylococcus epidermidis RepID=Q8CSW9_STAES rbh
hypothetical protein
NECEvent2014_4_1_scaffold_231_5

Not on your lists

3147..3674
DNA (528bp) protein (176aa)
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=45 Tax=Staphylococcus epidermidis RepID=PYRR_STAES rbh
Bifunctional protein pyrR {ECO:0000313|EMBL:ETJ17516.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_4_1_scaffold_231_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3922..5214
DNA (1293bp) protein (431aa)
Uracil permease n=50 Tax=Staphylococcus epidermidis RepID=Q8CPJ8_STAES rbh
Putative permease {ECO:0000313|EMBL:EFE59507.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uracil permease
NECEvent2014_4_1_scaffold_231_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5240..6121
DNA (882bp) protein (294aa)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=66 Tax=Staphylococcus epidermidis RepID=PYRB_STAES rbh
NECEvent2014_4_1_scaffold_231_8

Not on your lists

6139..7416
DNA (1278bp) protein (426aa)
Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=48 Tax=Staphylococcus epidermidis RepID=C5Q8I8_STAEP rbh
Dihydroorotase {ECO:0000313|EMBL:ETJ17513.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_4_1_scaffold_231_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7417..8517
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain {ECO:0000255|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000255|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=33 Tax=Staphylococcus epidermidis RepID=CARA_STAES rbh
NECEvent2014_4_1_scaffold_231_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8510..11683
DNA (3174bp) protein (1058aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Stap
Carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=17 Tax=Staphylococcus epidermidis RepID=D4FJQ2_STAEP rbh
NECEvent2014_4_1_scaffold_231_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11712..12410
DNA (699bp) protein (233aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
Orotidine 5'-phosphate decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=D4FJQ1_STAEP rbh
orotidine 5'-phosphate decarboxylase
NECEvent2014_4_1_scaffold_231_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12411..13022
DNA (612bp) protein (204aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=45 Tax=Staphylococcus epidermidis RepID=PYRE_STAES rbh
NECEvent2014_4_1_scaffold_231_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13048..13254
DNA (207bp) protein (69aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q8CSW6_STAES
Uncharacterized protein {ECO:0000313|EMBL:EFE59500.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
NECEvent2014_4_1_scaffold_231_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13792..14199
DNA (408bp) protein (136aa)
Uncharacterized protein n=52 Tax=Staphylococcus epidermidis RepID=Q8CSW5_STAES
3-demethylubiquinone-9 3-methyltransferase domain protein {ECO:0000313|EMBL:EFE59498.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epide
hypothetical protein
NECEvent2014_4_1_scaffold_231_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14261..15958)
DNA (1698bp) protein (566aa)
Fibronectin-binding protein A domain protein n=30 Tax=Staphylococcus epidermidis RepID=D4FJP6_STAEP rbh
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EFE59497.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864
Fibronectin/fibrinogen-binding protein
NECEvent2014_4_1_scaffold_231_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16228..16851
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Ba
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=55 Tax=Staphylococcus epidermidis RepID=KGUA_STAES rbh
NECEvent2014_4_1_scaffold_231_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16851..17063
DNA (213bp) protein (71aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=30 Tax=Staphylococcus epidermidis RepID=D4FJP4_STAEP
NECEvent2014_4_1_scaffold_231_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17601..18800
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFE59494.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFE59494.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFE59494.1};; Tax
Pantothenate metabolism flavoprotein n=38 Tax=Staphylococcus epidermidis RepID=Q8CPJ1_STAES rbh
pantothenate metabolism flavoprotein
NECEvent2014_4_1_scaffold_231_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18800..21184
DNA (2385bp) protein (795aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=525375 species="Bacteria; F
PriA ,primosomal protein n=9 Tax=Staphylococcus epidermidis RepID=Q8CPJ0_STAES rbh
PriA,primosomal protein
Displaying 19 items

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