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NECEvent2014_4_1_scaffold_262

Alias: 174_001_scaffold_262

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_262_1
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
DNA invertase n=1 Tax=Acinetobacter baumannii EGD-HP18 RepID=U1TUW4_ACIBA
DNA invertase {ECO:0000313|EMBL:ERH68010.1}; TaxID=1358412 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
resolvase/integrase BinR
NECEvent2014_4_1_scaffold_262_2
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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548..1222
DNA (675bp) protein (225aa)
Transposase IS431 n=3 Tax=Staphylococcus RepID=L7X052_STAWS rbh
Transposase IS431 {ECO:0000313|EMBL:AGC91738.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
transposase IS431 rbh
NECEvent2014_4_1_scaffold_262_3

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comp(1387..1719)
DNA (333bp) protein (111aa)
Helix-turn-helix HxlR type n=4 Tax=Staphylococcus RepID=L7WZ93_STAWS
Transcriptional regulator HxlR, formaldehyde assimilation {ECO:0000313|EMBL:ETJ21579.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metageno
helix-turn-helix HxlR type
NECEvent2014_4_1_scaffold_262_4
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1809..2360)
DNA (552bp) protein (184aa)
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:EEQ80661.1}; EC=5.3.-.- {ECO:0000313|EMBL:EEQ80661.1};; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
6-phospho 3-hexuloisomerase n=1 Tax=Staphylococcus warneri L37603 RepID=C4WA41_STAWA rbh
sugar isomerase (SIS)
NECEvent2014_4_1_scaffold_262_5
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2360..2992)
DNA (633bp) protein (211aa)
Orotidine 5'-phosphate decarboxylase n=6 Tax=Staphylococcus RepID=L7WYC2_STAWS rbh
Putative 3-hexulose-6-phosphate synthase {ECO:0000313|EMBL:AGZ25956.1}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
orotidine 5'-phosphate decarboxylase
NECEvent2014_4_1_scaffold_262_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3193..4524
DNA (1332bp) protein (444aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=4 Tax=Staphylococcus RepID=L7WUR5_STAWS rbh
NECEvent2014_4_1_scaffold_262_7
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4556..5962
DNA (1407bp) protein (469aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=119
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=3 Tax=Staphylococcus RepID=L7X056_STAWS rbh
NECEvent2014_4_1_scaffold_262_8
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6026..7486
DNA (1461bp) protein (487aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Staphylococcus RepID=L7WZ99_STAWS rbh
glucose-6-phosphate 1-dehydrogenase
NECEvent2014_4_1_scaffold_262_9
Propionibacterium sp. DORA_15, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7525..8163
DNA (639bp) protein (213aa)
UPI0003D65F11 related cluster n=1 Tax=unknown RepID=UPI0003D65F11 rbh
NAD(P)H quinone oxidoreductase {ECO:0000313|EMBL:ETI86775.1}; Flags: Fragment;; TaxID=1403938 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source=
NAD(P)H quinone oxidoreductase
NECEvent2014_4_1_scaffold_262_10

Not on your lists

comp(9167..10399)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis (strain ATCC 12228) RepID=Q8CUB7_STAES rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ17795.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11947..12204
DNA (258bp) protein (86aa)
Uncharacterized protein n=12 Tax=Staphylococcus RepID=E2EAE3_STAAU
Uncharacterized protein {ECO:0000313|EMBL:ADK23686.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12194..12856
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Staphylococcus RepID=D2JCM4_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ADA80348.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_13

Not on your lists

12862..13500
DNA (639bp) protein (213aa)
Uncharacterized protein n=8 Tax=Staphylococcus RepID=D2JCM5_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ17798.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_14

Not on your lists

13606..14124
DNA (519bp) protein (173aa)
Uncharacterized protein n=9 Tax=Staphylococcus RepID=D2JCM6_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ17799.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14202..15068
DNA (867bp) protein (289aa)
Uncharacterized protein n=10 Tax=Staphylococcus RepID=D2JCM7_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ADA80690.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_16

Not on your lists

15182..15436
DNA (255bp) protein (85aa)
Uncharacterized protein n=9 Tax=Staphylococcus RepID=D2JCM8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ17801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_4_1_scaffold_262_17

Not on your lists

comp(15762..16373)
DNA (612bp) protein (204aa)
Uncharacterized protein n=11 Tax=Staphylococcus RepID=D2JCM9_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ17802.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative XRE-family transcriptional regulator
Displaying 17 items

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