ggKbase home page

NECEvent2014_4_1_scaffold_313

Alias: 174_001_scaffold_313

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_313_trna_2
unknown

Not on your lists

comp(111..181)
DNA (71bp)
transferRNA
NECEvent2014_4_1_scaffold_313_trna_1
unknown

Not on your lists

comp(207..290)
DNA (84bp)
transferRNA
NECEvent2014_4_1_scaffold_313_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1048..1503)
DNA (456bp) protein (152aa)
Protein SprT-like n=41 Tax=Staphylococcus epidermidis RepID=SPRTL_STAEQ rbh
Protein SprT-like {ECO:0000255|HAMAP-Rule:MF_00745}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
hypothetical protein
NECEvent2014_4_1_scaffold_313_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1496..3646)
DNA (2151bp) protein (717aa)
S1 RNA binding domain protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMF2_STAEQ rbh
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EFE60115.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W
S1 RNA binding domain protein
NECEvent2014_4_1_scaffold_313_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3934..4704)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=34 Tax=Staphylococcus epidermidis RepID=Q5HMF1_STAEQ rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 /
RNA polymerase sigma factor SigB
NECEvent2014_4_1_scaffold_313_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4679..5158)
DNA (480bp) protein (160aa)
Serine-protein kinase RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00638};; Anti-sigma-B factor {ECO:0000256|HAMAP-Rule:MF_00638}; Sigma-B negative effector RsbW {ECO
Serine-protein kinase rsbW (EC:2.7.11.1)
Serine-protein kinase RsbW n=64 Tax=Staphylococcus epidermidis RepID=RSBW_STAEQ rbh
NECEvent2014_4_1_scaffold_313_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5160..5486)
DNA (327bp) protein (109aa)
Anti-sigma-B factor antagonist n=78 Tax=Staphylococcus epidermidis RepID=RSBV_STAEQ
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
NECEvent2014_4_1_scaffold_313_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5586..6587)
DNA (1002bp) protein (334aa)
Sigma factor B regulator protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HME8_STAEQ rbh
Putative phosphoserine phosphatase {ECO:0000313|EMBL:ETJ12719.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
rsbU; sigma factor B regulator protein
NECEvent2014_4_1_scaffold_313_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6932..7294)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcu
mRNA interferase MazF n=54 Tax=Staphylococcus epidermidis RepID=MAZF_STAEQ
Programmed cell death toxin YdcE
NECEvent2014_4_1_scaffold_313_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7291..7461)
DNA (171bp) protein (57aa)
Antitoxin MazE n=81 Tax=Staphylococcus epidermidis RepID=MAZE_STAEQ
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE60121.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
Programmed cell death antitoxin YdcD
NECEvent2014_4_1_scaffold_313_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7548..8696)
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=525375 species="Bacteria; Firmicu
Alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Staphylococcus epidermidis BVS058A4 RepID=K8NLJ4_STAEP rbh
NECEvent2014_4_1_scaffold_313_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8763..9116)
DNA (354bp) protein (118aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
Holo-[acyl-carrier protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=21 Tax=Staphylococcus epidermidis RepID=C5QD13_STAEP
NECEvent2014_4_1_scaffold_313_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9164..9673)
DNA (510bp) protein (170aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=C5QD12_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:EFE60124.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Hypothetical protein, ydbS homolog
NECEvent2014_4_1_scaffold_313_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9660..11171)
DNA (1512bp) protein (504aa)
Bacterial membrane flanked domain protein n=1 Tax=Staphylococcus epidermidis VCU071 RepID=H0DRM0_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:EFE60125.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Hypothetical protein, ydbT homolog
NECEvent2014_4_1_scaffold_313_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11158..11637)
DNA (480bp) protein (160aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=C5QD10_STAEP rbh
Uncharacterized protein {ECO:0000313|EMBL:EFE60126.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Hypothetical protein SAV2074
Displaying 15 items

View Taxonomy