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NECEvent2014_4_1_scaffold_336

Alias: 174_001_scaffold_336

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_1_scaffold_336_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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89..2059
DNA (1971bp) protein (657aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=35 Tax=Staphylococcus epidermidis RepID=SYM_STAEQ rbh
NECEvent2014_4_1_scaffold_336_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2084..2857
DNA (774bp) protein (258aa)
Deoxyribonuclease, TatD family n=64 Tax=Staphylococcus epidermidis RepID=Q5HRR4_STAEQ rbh
Hydrolase, TatD family {ECO:0000313|EMBL:EES37268.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Putative deoxyribonuclease YcfH
NECEvent2014_4_1_scaffold_336_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3064..3609
DNA (546bp) protein (182aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 n=51 Tax=Staphylococcus epidermidis RepID=Q5HRR3_STAEQ rbh
NECEvent2014_4_1_scaffold_336_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3610..4500
DNA (891bp) protein (297aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=48 Tax=Staphylococcus epidermidis RepID=RSMA_STAEQ rbh
NECEvent2014_4_1_scaffold_336_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4600..4863
DNA (264bp) protein (88aa)
Uncharacterized protein n=85 Tax=Staphylococcus RepID=Q5HRR1_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:AAW53477.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Veg protein
NECEvent2014_4_1_scaffold_336_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5256..6104
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Staphylococcus epidermidis RepID=J0GN59_STAEP rbh
NECEvent2014_4_1_scaffold_336_7

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6119..6943
DNA (825bp) protein (275aa)
Pur operon repressor n=48 Tax=Staphylococcus epidermidis RepID=Q5HRQ9_STAEQ rbh
Purine operon repressor {ECO:0000313|EMBL:ETJ21231.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
purR; pur operon repressor
NECEvent2014_4_1_scaffold_336_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6965..7345
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP, putative n=65 Tax=Staphylococcus epidermidis RepID=Q5HRQ8_STAEQ
Endoribonuclease L-PSP {ECO:0000313|EMBL:ESV18571.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Endoribonuclease L-PSP
NECEvent2014_4_1_scaffold_336_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7405..7713
DNA (309bp) protein (103aa)
Putative septation protein SpoVG n=84 Tax=Staphylococcus RepID=SP5G_STAEQ
Putative septation protein SpoVG {ECO:0000255|HAMAP-Rule:MF_00819}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1
spoVG; regulatory protein SpoVG
NECEvent2014_4_1_scaffold_336_10

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8323..9033
DNA (711bp) protein (237aa)
N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23)
Putative bifunctional protein GlmU (Fragment) n=2 Tax=Staphylococcus RepID=H3W0Q3_STAEP rbh
Bifunctional protein GlmU {ECO:0000313|EMBL:ETJ21234.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 10 items

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