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NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

NECEvent2014_4_1_Propionibacterium_acnes_59_5
In projects: NECEvent2014_4_1

Consensus taxonomy: Propionibacterium acnes  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-200 of 666 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_1_scaffold_1555 174_001_scaffold_1555
Species: Propionibacterium acnes (100%)
1 1089 bp 58.86 4.96 99.72
NECEvent2014_4_1_scaffold_1563 174_001_scaffold_1563
Species: CG_Propioni_01 (100%)
1 1086 bp 62.43 5.52 99.72
NECEvent2014_4_1_scaffold_1566 174_001_scaffold_1566
Species: Propionibacterium acnes (100%)
1 1083 bp 61.40 5.54 99.72
NECEvent2014_4_1_scaffold_1571 174_001_scaffold_1571
Species: CG_Propioni_01 (100%)
1 1080 bp 58.15 3.89 99.72
NECEvent2014_4_1_scaffold_1598 174_001_scaffold_1598
Species: Propionibacterium acnes (100%)
1 1062 bp 62.34 5.08 99.72
NECEvent2014_4_1_scaffold_1606 174_001_scaffold_1606
Species: Propionibacterium acnes (100%)
1 1059 bp 60.53 4.53 99.72
NECEvent2014_4_1_scaffold_1623 174_001_scaffold_1623
Species: Propionibacterium acnes (100%)
1 1047 bp 58.17 7.16 99.71
NECEvent2014_4_1_scaffold_1639 174_001_scaffold_1639
Species: Propionibacterium acnes (100%)
1 1041 bp 59.56 5.48 99.71
NECEvent2014_4_1_scaffold_1653 174_001_scaffold_1653
Species: Propionibacterium acnes (100%)
1 1035 bp 60.77 4.35 99.71
NECEvent2014_4_1_scaffold_790 174_001_scaffold_790
Species: Propionibacterium acnes (100%)
2 2049 bp 53.59 4.39 99.71
NECEvent2014_4_1_scaffold_1675 174_001_scaffold_1675
Species: Propionibacterium acnes (100%)
1 1023 bp 63.05 3.52 99.71
NECEvent2014_4_1_scaffold_1696 174_001_scaffold_1696
Species: Propionibacterium acnes (100%)
2 1011 bp 58.56 4.75 99.70
NECEvent2014_4_1_scaffold_1708 174_001_scaffold_1708
Species: Corynebacterium pseudogenitalium (100%)
1 1005 bp 61.19 3.28 99.70
NECEvent2014_4_1_scaffold_1256 174_001_scaffold_1256
Species: Propionibacterium acnes (100%)
1 1303 bp 59.55 5.30 99.69
NECEvent2014_4_1_scaffold_1342 174_001_scaffold_1342
Species: Propionibacterium acnes (100%)
1 1234 bp 63.78 5.11 99.68
NECEvent2014_4_1_scaffold_1489 174_001_scaffold_1489
Species: CG_Propioni_01 (50%)
2 1132 bp 59.81 4.77 99.65
NECEvent2014_4_1_scaffold_1002 174_001_scaffold_1002
Species: CG_Propioni_01 (50%)
2 1575 bp 53.46 6.67 99.62
NECEvent2014_4_1_scaffold_1659 174_001_scaffold_1659
Species: Propionibacterium acnes (100%)
1 1030 bp 59.61 4.95 99.61
NECEvent2014_4_1_scaffold_1707 174_001_scaffold_1707
Species: Propionibacterium acnes (100%)
1 1006 bp 59.74 4.17 99.60
NECEvent2014_4_1_scaffold_860 174_001_scaffold_860
Species: Propionibacterium acnes (100%)
3 1892 bp 63.11 5.47 99.58
NECEvent2014_4_1_scaffold_1612 174_001_scaffold_1612
Species: Propionibacterium acnes (100%)
2 1055 bp 65.12 4.27 99.53
NECEvent2014_4_1_scaffold_775 174_001_scaffold_775
Species: Propionibacterium acnes (66.67%)
3 2065 bp 61.36 5.74 99.52
NECEvent2014_4_1_scaffold_1123 174_001_scaffold_1123
Species: Propionibacterium acnes (100%)
2 1435 bp 60.56 6.06 99.51
NECEvent2014_4_1_scaffold_1010 174_001_scaffold_1010
Species: CG_Propioni_01 (50%)
2 1562 bp 60.12 3.94 99.49
NECEvent2014_4_1_scaffold_1572 174_001_scaffold_1572
Species: Propionibacterium sp. KPL1847 (50%)
2 1080 bp 62.31 6.11 99.44
NECEvent2014_4_1_scaffold_1282 174_001_scaffold_1282
Species: Propionibacterium acnes (66.67%)
3 1280 bp 58.05 5.63 99.38
NECEvent2014_4_1_scaffold_1153 174_001_scaffold_1153
Species: Propionibacterium acnes (100%)
2 1395 bp 61.00 3.87 99.35
NECEvent2014_4_1_scaffold_729 174_001_scaffold_729
Species: Propionibacterium acnes (100%)
2 2178 bp 64.14 4.68 99.31
NECEvent2014_4_1_scaffold_1258 174_001_scaffold_1258
Species: Corynebacterium minutissimum (50%)
2 1302 bp 51.23 2.30 99.31
NECEvent2014_4_1_scaffold_1144 174_001_scaffold_1144
Species: Propionibacterium acnes (100%)
1 1405 bp 59.00 6.62 99.29
NECEvent2014_4_1_scaffold_1270 174_001_scaffold_1270
Species: Propionibacterium acnes (100%)
2 1288 bp 61.88 4.43 99.22
NECEvent2014_4_1_scaffold_615 174_001_scaffold_615
Genus: Corynebacterium (50%)
4 2691 bp 52.77 4.91 99.22
NECEvent2014_4_1_scaffold_980 174_001_scaffold_980
Species: Propionibacterium acnes (100%)
2 1618 bp 60.57 3.71 99.20
NECEvent2014_4_1_scaffold_719 174_001_scaffold_719
Species: CG_Propioni_01 (50%)
2 2208 bp 59.56 6.52 99.18
NECEvent2014_4_1_scaffold_1533 174_001_scaffold_1533
Species: CG_Propioni_01 (50%)
2 1101 bp 61.94 5.59 99.18
NECEvent2014_4_1_scaffold_1412 174_001_scaffold_1412
Species: Propionibacterium acnes (100%)
2 1177 bp 56.16 4.84 99.15
NECEvent2014_4_1_scaffold_1657 174_001_scaffold_1657
Species: CG_Propioni_01 (100%)
1 1032 bp 58.82 6.40 99.13
NECEvent2014_4_1_scaffold_1340 174_001_scaffold_1340
Species: CG_Propioni_01 (50%)
2 1235 bp 62.02 6.80 99.11
NECEvent2014_4_1_scaffold_1180 174_001_scaffold_1180
Species: Propionibacterium acnes (66.67%)
3 1378 bp 63.86 5.44 99.06
NECEvent2014_4_1_scaffold_1103 174_001_scaffold_1103
Species: Propionibacterium acnes (100%)
3 1454 bp 58.94 4.54 99.04
NECEvent2014_4_1_scaffold_970 174_001_scaffold_970
Species: Propionibacterium acnes (75%)
4 1630 bp 59.02 4.05 99.02
NECEvent2014_4_1_scaffold_1704 174_001_scaffold_1704
Species: Propionibacterium acnes (100%)
2 1006 bp 55.77 5.82 99.01
NECEvent2014_4_1_scaffold_1450 174_001_scaffold_1450
Species: Propionibacterium acnes (100%)
2 1155 bp 57.66 3.12 98.96
NECEvent2014_4_1_scaffold_1140 174_001_scaffold_1140
Species: Corynebacterium pseudogenitalium (100%)
2 1407 bp 57.71 4.26 98.93
NECEvent2014_4_1_scaffold_648 174_001_scaffold_648
Species: Propionibacterium acnes (100%)
5 2485 bp 63.02 3.74 98.87
NECEvent2014_4_1_scaffold_1634 174_001_scaffold_1634
Species: Propionibacterium acnes (100%)
2 1044 bp 59.39 3.45 98.85
NECEvent2014_4_1_scaffold_785 174_001_scaffold_785
Species: Propionibacterium acnes (100%)
3 2052 bp 60.62 6.29 98.83
NECEvent2014_4_1_scaffold_1390 174_001_scaffold_1390
Species: Propionibacterium acnes (100%)
1 1190 bp 56.22 5.04 98.82
NECEvent2014_4_1_scaffold_875 174_001_scaffold_875
Species: Propionibacterium acnes (100%)
3 1840 bp 61.58 4.81 98.80
NECEvent2014_4_1_scaffold_1056 174_001_scaffold_1056
Species: CG_Propioni_01 (50%)
2 1510 bp 62.25 5.56 98.74
Displaying items 151-200 of 666 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.