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NECEvent2014_4_2_scaffold_25

Alias: 174_002_scaffold_25

Search features with annotation key words

Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_2_scaffold_25_31
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37478..38419)
DNA (942bp) protein (314aa)
glucokinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASF8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35654.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_25_32
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38906..39433
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH28_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35653.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RNA-binding region-containing protein (RNP-1)
NECEvent2014_4_2_scaffold_25_33
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39595..40956
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUF4_CLOBU rbh
Radical SAM {ECO:0000313|EMBL:ETI90954.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
radical SAM
NECEvent2014_4_2_scaffold_25_34
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40959..41708
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT2_CLOBU rbh
DNA metabolism protein {ECO:0000313|EMBL:KHD16484.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_2_scaffold_25_35
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42046..43767)
DNA (1722bp) protein (574aa)
Membrane associated methyl-accepting chemotaxis protein with HAMP domain n=3 Tax=Clostridium acetobutylicum RepID=F0KAU7_CLOAE rbh
Membrane associated methyl-accepting chemotaxis protein with HAMP domain
Membrane associated methyl-accepting chemotaxis protein with HAMP domain {ECO:0000313|EMBL:AAK81437.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_4_2_scaffold_25_36
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43989..45386)
DNA (1398bp) protein (466aa)
UPI0003D5914E related cluster n=1 Tax=unknown RepID=UPI0003D5914E rbh
Melibiose carrier protein {ECO:0000313|EMBL:ETI90956.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
melibiose:sodium symporter
NECEvent2014_4_2_scaffold_25_37
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45658..46533
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AB30_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ23300.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
NECEvent2014_4_2_scaffold_25_38
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(46695..47318)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S1N2S7_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOW79888.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 =
hypothetical protein
NECEvent2014_4_2_scaffold_25_39
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(47320..49584)
DNA (2265bp) protein (755aa)
Alpha-galactosidase {ECO:0000313|EMBL:EEO36259.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EEO36259.1};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source=
galA; alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF3_FUSMR rbh
NECEvent2014_4_2_scaffold_25_40
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(49604..50770)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0003118A37 rbh
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EOH91658.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Entero
sugar (Glycoside-Pentoside-Hexuronide) transporter
NECEvent2014_4_2_scaffold_25_41
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50860..50961)
DNA (102bp) protein (34aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Dorea sp. CAG:317 RepID=R6WMG2_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDD08074.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.
sugar (Glycoside-Pentoside-Hexuronide) transporter
NECEvent2014_4_2_scaffold_25_42
unknown

Not on your lists

51142..51255
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_4_2_scaffold_25_43
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51536..52366)
DNA (831bp) protein (277aa)
UPI0003D5FCD5 related cluster n=1 Tax=unknown RepID=UPI0003D5FCD5 rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ETI90957.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
AraC family transcriptional regulator
NECEvent2014_4_2_scaffold_25_44
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52491..53810
DNA (1320bp) protein (440aa)
UPI0003D60E4F related cluster n=1 Tax=unknown RepID=UPI0003D60E4F rbh
Glycoside hydrolase, family 4 {ECO:0000313|EMBL:ETI90958.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
glycoside hydrolase family protein
NECEvent2014_4_2_scaffold_25_45
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53885..54739
DNA (855bp) protein (285aa)
UPI0003D64CC3 related cluster n=1 Tax=unknown RepID=UPI0003D64CC3 rbh
AraC family bacterial regulatory protein {ECO:0000313|EMBL:ETI90959.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
msmR1; Msm operon regulatory protein MsmR
NECEvent2014_4_2_scaffold_25_46
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54796..56073)
DNA (1278bp) protein (426aa)
UPI0003D62B10 related cluster n=1 Tax=unknown RepID=UPI0003D62B10 rbh
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ETI90960.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
ABC-type sugar transport system, periplasmic component
NECEvent2014_4_2_scaffold_25_47
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56093..56182)
DNA (90bp) protein (30aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI90961.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_2_scaffold_25_48
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56294..57121)
DNA (828bp) protein (276aa)
L-arabinose transport system permease protein AraQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K823_CLOBU rbh
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:KJZ91106.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
ABC transporter permease
NECEvent2014_4_2_scaffold_25_49
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57141..58073)
DNA (933bp) protein (311aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGA5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83965.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter permease
NECEvent2014_4_2_scaffold_25_50
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58165..59442)
DNA (1278bp) protein (426aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC5_CLOBU rbh
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:KJZ83749.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
ABC transporter substrate-binding protein
NECEvent2014_4_2_scaffold_25_51
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59699..62047)
DNA (2349bp) protein (783aa)
agaR; alpha-galactosidase 1 (EC:3.2.1.22)
UPI0003D5F5CC related cluster n=1 Tax=unknown RepID=UPI0003D5F5CC rbh
Alpha-galactosidase AgaN {ECO:0000313|EMBL:ETI90965.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_2_scaffold_25_52
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62078..62947
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLH5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83731.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
msmR1; Msm operon regulatory protein MsmR
NECEvent2014_4_2_scaffold_25_53
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63022..64437)
DNA (1416bp) protein (472aa)
Sucrose phosphorylase {ECO:0000313|EMBL:KJZ86032.1}; EC=2.4.1.7 {ECO:0000313|EMBL:KJZ86032.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
sucrose phosphorylase (EC:2.4.1.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K819_CLOBU rbh
NECEvent2014_4_2_scaffold_25_54
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64791..65960
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase n=2 Tax=Clostridium butyricum RepID=M8KGA2_CLOBU rbh
NECEvent2014_4_2_scaffold_25_55
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66019..67008
DNA (990bp) protein (330aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEP52801.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEP52801.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=4 Tax=Clostridium butyricum RepID=B1QZE8_CLOBU rbh
UDP-glucose 4-epimerase
NECEvent2014_4_2_scaffold_25_56
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67110..68603
DNA (1494bp) protein (498aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
galT; galactose-1-phosphate uridylyltransferase GalT (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASD8_CLOBU rbh
NECEvent2014_4_2_scaffold_25_57
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68791..69798
DNA (1008bp) protein (336aa)
Transcriptional regulators of the LacI family n=4 Tax=Clostridium butyricum RepID=B1QZE6_CLOBU rbh
Catabolite control protein A {ECO:0000313|EMBL:KJZ86018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alanine racemase
NECEvent2014_4_2_scaffold_25_58
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69983..71401)
DNA (1419bp) protein (473aa)
thiH1; 2-iminoacetate synthase ThiH (EC:4.1.99.19)
Thiamine biosynthesis protein ThiH n=3 Tax=Clostridium butyricum RepID=B1QZE4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ95441.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_2_scaffold_25_59
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71509..71757)
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=N9Z6Z1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86151.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative iron-only hydrogenase system regulator
NECEvent2014_4_2_scaffold_25_60
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72139..76587)
DNA (4449bp) protein (1483aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7G4_CLOBU rbh
alpha-amylase
Displaying items 31-60 of 72 in total

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