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NECEvent2014_4_2_scaffold_25

Alias: 174_002_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_2_scaffold_25_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174..1868)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUI3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35672.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
NECEvent2014_4_2_scaffold_25_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2016..4100)
DNA (2085bp) protein (695aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=997898 species="Bacteria; Firmicutes; Clostridi
pbg; beta-galactosidase Pbg (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z738_CLOBU rbh
NECEvent2014_4_2_scaffold_25_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4268..5110)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=Clostridium butyricum RepID=M8K838_CLOBU rbh
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
binding-protein-dependent transport systems inner membrane component
NECEvent2014_4_2_scaffold_25_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5103..5996)
DNA (894bp) protein (298aa)
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU rbh
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEP53858.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
binding-protein-dependent transport systems inner membrane component
NECEvent2014_4_2_scaffold_25_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6162..7466)
DNA (1305bp) protein (435aa)
Putative arabinose-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCE1_CLOBU rbh
ABC transporter sugar binding protein {ECO:0000313|EMBL:KJZ83759.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
extracellular solute-binding protein
NECEvent2014_4_2_scaffold_25_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7712..8713)
DNA (1002bp) protein (334aa)
HTH-type transcriptional regulator EbgR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMU3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35666.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
regulatory protein, LacI
NECEvent2014_4_2_scaffold_25_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8858..9379)
DNA (522bp) protein (174aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Fmn/NADPH-binding flavoprotein n=2 Tax=Clostridium butyricum RepID=M8JLJ4_CLOBU rbh
Putative NADH dehydrogenase/NAD(P)H nitroreductase {ECO:0000313|EMBL:KJZ83774.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_4_2_scaffold_25_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9406..9897)
DNA (492bp) protein (164aa)
Flavodoxin n=4 Tax=Clostridium butyricum RepID=B1QWE5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83775.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
floX; flavodoxin FloX
NECEvent2014_4_2_scaffold_25_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10039..10890)
DNA (852bp) protein (284aa)
speB; agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH39_CLOBU rbh
Agmatinase {ECO:0000313|EMBL:ENZ35663.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_25_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10953..12098)
DNA (1146bp) protein (382aa)
nspC; carboxynorspermidine/carboxyspermidine decarboxylase NspC (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUG9_CLOBU rbh
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:ETI90944.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum D
NECEvent2014_4_2_scaffold_25_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12236..13435)
DNA (1200bp) protein (400aa)
saccharopine dehydrogenase (EC:1.5.1.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z726_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96973.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_2_scaffold_25_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13494..14348)
DNA (855bp) protein (285aa)
speE; spermidine synthase SpeE (EC:2.5.1.16)
UPI0003D60E16 related cluster n=1 Tax=unknown RepID=UPI0003D60E16 rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=14
NECEvent2014_4_2_scaffold_25_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14431..15957)
DNA (1527bp) protein (509aa)
Arginine decarboxylase {ECO:0000313|EMBL:KJZ83739.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KJZ83739.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
arginine decarboxylase (EC:4.1.1.19)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASG3_CLOBU rbh
NECEvent2014_4_2_scaffold_25_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15970..16788)
DNA (819bp) protein (273aa)
speD; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH34_CLOBU rbh
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
NECEvent2014_4_2_scaffold_25_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17455..18180
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WU02_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KHD16499.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_2_scaffold_25_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18311..19216
DNA (906bp) protein (302aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LXH4_9CLOT rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD16498.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
transcriptional regulator, ArsR family
NECEvent2014_4_2_scaffold_25_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19277..20605)
DNA (1329bp) protein (443aa)
Beta-xylosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8T3_9CLOT rbh
Beta-xylosidase {ECO:0000313|EMBL:EKQ56228.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Madding
beta-xylosidase
NECEvent2014_4_2_scaffold_25_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20748..21647)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUU5_CLOC7 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD16538.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_4_2_scaffold_25_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21667..22566)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUU4_CLOC7 rbh
Sugar transporter {ECO:0000313|EMBL:KHD16537.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_4_2_scaffold_25_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22665..24026)
DNA (1362bp) protein (454aa)
Extracellular solute-binding protein family 1 n=2 Tax=Geobacillus RepID=C9RT68_GEOSY rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16497.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
extracellular solute-binding protein
NECEvent2014_4_2_scaffold_25_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24303..25280)
DNA (978bp) protein (326aa)
Putative beta-xylosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5H6_9CLOT rbh
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KHD16496.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative beta-xylosidase
NECEvent2014_4_2_scaffold_25_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25578..25832)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TRU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHD16495.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_2_scaffold_25_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25837..27312)
DNA (1476bp) protein (492aa)
Alpha-L-arabinofuranosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAB4_9CLOT rbh
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KHD16494.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
alpha-L-arabinofuranosidase
NECEvent2014_4_2_scaffold_25_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27583..28500
DNA (918bp) protein (306aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Q2_9CLOT rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD16493.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
regulatory protein ArsR
NECEvent2014_4_2_scaffold_25_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28562..30019)
DNA (1458bp) protein (486aa)
Arabinan endo-1,5-alpha-L-arabinosidase n=2 Tax=Bacillus atrophaeus RepID=E3E0Z1_BACA1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD16536.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
extracellular endo-alpha-(1->5)-L-arabinanase
NECEvent2014_4_2_scaffold_25_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30167..32443)
DNA (2277bp) protein (759aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Bacillus subtilis subsp. spizizenii (strain TU-B-10) RepID=G4P1L4_BACPT rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KHD13435.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
acetyl-CoA carboxylase, biotin carboxylase
NECEvent2014_4_2_scaffold_25_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32583..33476
DNA (894bp) protein (298aa)
AraC family transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FST1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD13434.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
AraC family transcriptional regulator
NECEvent2014_4_2_scaffold_25_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33557..34702)
DNA (1146bp) protein (382aa)
UPI0003D606EB related cluster n=1 Tax=unknown RepID=UPI0003D606EB rbh
Membrane protein {ECO:0000313|EMBL:KHD16490.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YibE/F family protein
NECEvent2014_4_2_scaffold_25_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34719..36278)
DNA (1560bp) protein (520aa)
alkaline phosphatase (EC:3.1.3.1)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z720_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35656.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_25_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36498..37190)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7I4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35655.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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