ggKbase home page

NECEvent2014_4_2_scaffold_25_4

Organism: NECEvent2014_4_2_Clostridium_butyricum_28_558

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(5103..5996)

Top 3 Functional Annotations

Value Algorithm Source
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 589
  • Evalue 1.90e-165
  • rbh
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEP53858.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 589
  • Evalue 2.70e-165
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 297.0
  • Bit_score: 469
  • Evalue 8.10e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
ATGAAGCAAAAAAGAAGCCGTGGAATTGAAAGTAAAACTAATAAATGGGGTTGGGGATTTGTAGCCCTAAGTATAGCTTGTATTTCATTATTTGTCTTTTATCCAACCATTCAATCATTTATAACATCATTACAATCAGGGATGGGTAATAACCTTAAATTTGTAGGTTTTGCTAACTATACACGATTAATGGGTGATGCTACTTTTAAAAAGGCAGTTGGAAATACGTTCTTATATCTTATCGTGCAGGTTCCTGTAATGATAATTTTAGCACTTGTAATAGCTACAACATTAAATGATCCGAAATTAAAATTTAAAGGATTTTTTAGAACTTCTATATTCTTACCTTGTGTAACATCATTAGTTGCTTATTCAATAATTATGAAAAGTATATTTGCTTCAGATGGTTTAGTTAATAAGTTACTTATGACTATTAATGTAATTTCAGTACCTATAGAATGGGTTACAGATCCAATTTGGGCAAAAGTTTTAATAATTATTGCCATAACATGGAGATGGACAGGTTATAACATGATATTCTACCTATCTGGTTTACAAAATATAGAACCATCAATTTATGAAGCGGCAGATATAGATGGAGCTTCATCATTTAAAAAATTTACAAAAATAACAGTTCCACTTCTAAAACCAATAATTCTTTTCACAACGATTACTTCAACAATAGGTACATTACAGTTATTTGATGAAGTTATGAATATTACAAAGGGTGGACCTGCAAATGCAACGACAACAATTTCACACTACATTTATAACTTATGTTTCACATATACACCAAACTTTGGATATGCAGCAGCAGTAGCTTATGTAGTAGTTATAATGATTGTAATCTTATCATTAATCCAATTTAAGGTAGGAGGAGATAGCAATGAGTAA
PROTEIN sequence
Length: 298
MKQKRSRGIESKTNKWGWGFVALSIACISLFVFYPTIQSFITSLQSGMGNNLKFVGFANYTRLMGDATFKKAVGNTFLYLIVQVPVMIILALVIATTLNDPKLKFKGFFRTSIFLPCVTSLVAYSIIMKSIFASDGLVNKLLMTINVISVPIEWVTDPIWAKVLIIIAITWRWTGYNMIFYLSGLQNIEPSIYEAADIDGASSFKKFTKITVPLLKPIILFTTITSTIGTLQLFDEVMNITKGGPANATTTISHYIYNLCFTYTPNFGYAAAVAYVVVIMIVILSLIQFKVGGDSNE*