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NECEvent2014_4_2_scaffold_29

Alias: 174_002_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_2_scaffold_29_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124..2097
DNA (1974bp) protein (658aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KFR5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33270.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis sensory transducer
NECEvent2014_4_2_scaffold_29_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2196..2795)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7H6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_2_scaffold_29_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3074..4129
DNA (1056bp) protein (352aa)
D-galactose-binding periplasmic protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKW8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33268.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mglB1; D-galactose-binding periplasmic protein MglB
NECEvent2014_4_2_scaffold_29_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4290..5312
DNA (1023bp) protein (341aa)
lyc; autolytic lysozyme Lyc (EC:3.2.1.17)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMF1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33267.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_29_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5589..8918
DNA (3330bp) protein (1110aa)
Tetratricopeptide repeat domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBT9_CLOBU rbh
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:EEP53617.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
hypothetical protein
NECEvent2014_4_2_scaffold_29_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9128..9460
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53104.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_2_scaffold_29_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10057..11277
DNA (1221bp) protein (407aa)
fliB; flagellin lysine-N-methylase FliB (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA41_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33263.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_29_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11368..11931
DNA (564bp) protein (188aa)
Accessory gene regulator B superfamily n=2 Tax=Clostridium butyricum RepID=B1QXS4_CLOBU rbh
Putative accessory gene regulator protein B {ECO:0000313|EMBL:EEP54917.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium but
accessory gene regulator B
NECEvent2014_4_2_scaffold_29_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12051..12719
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JBU4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_2_scaffold_29_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12785..14617)
DNA (1833bp) protein (611aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R0_CLOBU rbh
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
NECEvent2014_4_2_scaffold_29_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15239..15478
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33259.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_2_scaffold_29_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15678..16547
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA38_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33258.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM domain protein
NECEvent2014_4_2_scaffold_29_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16636..17226
DNA (591bp) protein (197aa)
Rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QXS9_CLOBU rbh
Rubrerythrin {ECO:0000313|EMBL:KJZ83694.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rbr; rubrerythrin
NECEvent2014_4_2_scaffold_29_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17334..17912
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXT0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_2_scaffold_29_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18106..18708
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=4 Tax=Clostridium butyricum RepID=B1QXT1_CLOBU rbh
NECEvent2014_4_2_scaffold_29_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18857..19900
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridia
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridium butyricum RepID=B1QXT2_CLOBU rbh
ruvB; Holliday junction DNA helicase RuvB
NECEvent2014_4_2_scaffold_29_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20058..21083
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:M
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium butyricum RepID=M8JKY6_CLOBU rbh
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
NECEvent2014_4_2_scaffold_29_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21277..22413
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QXT4_CLOBU rbh
NECEvent2014_4_2_scaffold_29_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22682..22966
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=3 Tax=Clostridium butyricum RepID=B1QXT5_CLOBU
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJZ83700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
preprotein translocase, YajC subunit
NECEvent2014_4_2_scaffold_29_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23124..23498
DNA (375bp) protein (125aa)
UPI000399FD18 related cluster n=1 Tax=unknown RepID=UPI000399FD18
Membrane protein {ECO:0000313|EMBL:ETI91035.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
membrane protein
NECEvent2014_4_2_scaffold_29_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23884..25143
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
secD; protein translocase subunit SecD
NECEvent2014_4_2_scaffold_29_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25136..26005
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
secF; protein translocase subunit SecF
NECEvent2014_4_2_scaffold_29_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26136..27014
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Phosphoesterase, RecJ domain protein n=2 Tax=Clostridium butyricum RepID=C4IKU0_CLOBU rbh
Phosphoesterase, RecJ domain protein {ECO:0000313|EMBL:EEP53743.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_4_2_scaffold_29_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27141..27659
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU rbh
NECEvent2014_4_2_scaffold_29_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27844..30057
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:KJZ83633.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJZ83633.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Clostridium butyricum RepID=C4IKU2_CLOBU rbh
NECEvent2014_4_2_scaffold_29_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30123..30572
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=632245 species="Bacter
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Clostridium butyricum RepID=B1R2Q3_CLOBU
NECEvent2014_4_2_scaffold_29_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30675..31274
DNA (600bp) protein (200aa)
Metallo-beta-lactamase family protein n=4 Tax=Clostridium butyricum RepID=B1R2Q4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33243.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metallo-beta-lactamase family protein
NECEvent2014_4_2_scaffold_29_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31436..32863
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EEP54134.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEP54134.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase 2 n=3 Tax=Clostridium butyricum RepID=B1R2Q5_CLOBU rbh
NECEvent2014_4_2_scaffold_29_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33003..34262
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=3 Tax=Clostridium butyricum RepID=B1R2Q6_CLOBU rbh
NECEvent2014_4_2_scaffold_29_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


34483..36282
DNA (1800bp) protein (600aa)
aspS1; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R2Q7_CLOBU rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ENZ33240.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 78 in total

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