ggKbase home page

NECEvent2014_4_2_scaffold_29_49

Organism: NECEvent2014_4_2_Clostridium_butyricum_28_558

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(55210..55797)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=3 Tax=Clostridium butyricum RepID=B1R2S6_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 390
  • Evalue 8.50e-106
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 390
  • Evalue 1.20e-105
rpsD2; 30S ribosomal protein S4 B similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 192.0
  • Bit_score: 319
  • Evalue 5.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
ATGGGACCAAGATTTAAGTTATGTAGAAGATTAGGATTAAACGTAAACGGTCATCCTAAAGCAATGAAAAGAGCTGGAAATGGCAGCGCTAGAGATTCAAAAAAATTATCACCTTATGGTACACAACTATTAGAAAAGCAAAGATTAAGAGCTTATTATGGTGTAATGGAAAAGCAATTTGCAACTTACGCAAGAAAAGCATTTAAAGATAAAGACCAAACAGGCTATGCCCTTATTAAAAGACTTGAATGCAGACTTGATAATATAGTTTTTAGACTTGGATTTGCAAGTTCACTAGCACAAGCTAGACAAATGGTTGTTCATGGACATATTTTAGTTAATGGAGAAAAGGTAAATATACCATCTTTCAATGTTAATATTGGTGATGTTGTTGCTTTAAGAGAAAAATCTCAAAAGAATGAAATGTTCAGAGATAATTTCTTATCTAACATACTTAATGTTTATCCTTATTTAACAAAGAATGAAGCTGAATTTTCAGGAAGCCTTTTAAGATATCCTGAAAGAAGTGAAGTTCCAATTCAAATTAATGATTCATTAGTAGTAGAATACTACTCAAAATTATTCTAA
PROTEIN sequence
Length: 196
MGPRFKLCRRLGLNVNGHPKAMKRAGNGSARDSKKLSPYGTQLLEKQRLRAYYGVMEKQFATYARKAFKDKDQTGYALIKRLECRLDNIVFRLGFASSLAQARQMVVHGHILVNGEKVNIPSFNVNIGDVVALREKSQKNEMFRDNFLSNILNVYPYLTKNEAEFSGSLLRYPERSEVPIQINDSLVVEYYSKLF*