ggKbase home page

NECEvent2014_4_3_Actinomyces_59_538_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_1
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(359..1627)
DNA (1269bp) protein (423aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002 rbh
tyrS; tyrosine--tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X6U4_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1749..3224)
DNA (1476bp) protein (492aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000 rbh
argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B682C2 rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_3
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3316..4545
DNA (1230bp) protein (410aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242 rbh
Arginine deiminase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P2I9_STRVO rbh
arginine deiminase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_4
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4451..6046)
DNA (1596bp) protein (532aa)
O-antigen polymerase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PM21_9ACTO rbh
O-antigen polymerase {ECO:0000313|EMBL:EKY16475.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379 rbh
exopolysaccharide production protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6240..7478)
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase rbh
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZC64_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_6
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7521..8039)
DNA (519bp) protein (173aa)
Arginine repressor n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X5V5_9ACTO
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
ArgR family transcriptional regulator
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_7
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8039..9292)
DNA (1254bp) protein (418aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=888050 species="Bacteria; Acti rbh
acetylornithine aminotransferase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B665A3 rbh
acetylornithine and succinylornithine aminotransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9289..10191)
DNA (903bp) protein (301aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra rbh
UPI0003D6901C related cluster n=1 Tax=unknown RepID=UPI0003D6901C rbh
acetylglutamate kinase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_9
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10188..11384)
DNA (1197bp) protein (399aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FT37_ISOV2 rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomona rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_10
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11381..12448)
DNA (1068bp) protein (356aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015 rbh
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WFT1_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_11
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12507..13028)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PL66_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKY16473.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0
protoporphyrinogen oxidase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_12
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13210..15864)
DNA (2655bp) protein (885aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR rbh
pheT; phenylalanine--tRNA ligase (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TY96_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_13
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15867..16952)
DNA (1086bp) protein (362aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t rbh
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1RGC0_9ACTO rbh
phenylalanyl-tRNA synthetase subunit alpha
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_14
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17129..17983
DNA (855bp) protein (285aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Actinomyces georgiae F0490 RepID=J0NC34_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_15
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18023..18943
DNA (921bp) protein (307aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974 rbh
Methionine aminopeptidase n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZCB0_9ACTO rbh
methionine aminopeptidase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_16
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19482..20213)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5C1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJN46296.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_17
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20210..21058)
DNA (849bp) protein (283aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=411466 species="Bacteria rbh
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDB0_9ACTO rbh
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_18
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(21130..22812)
DNA (1683bp) protein (561aa)
ChvD family ATP-binding cassette protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YSE6_9ACTO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CRH90565.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia t rbh
ABC transporter ATP-binding protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_19
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(22994..23491)
DNA (498bp) protein (166aa)
single-strand binding family protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B31D8B
Helix-destabilizing protein {ECO:0000313|EMBL:CRH93544.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomat
single-stranded DNA-binding protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_20
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23657..24379)
DNA (723bp) protein (241aa)
oligoribonuclease n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4F551
Uncharacterized protein {ECO:0000313|EMBL:EPD72725.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Exonuclease RNase T and DNA polymerase III
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_21
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24531..25850
DNA (1320bp) protein (440aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1105029 species="Bacteria; Actinobacte rbh
Threonine ammonia-lyase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YSN8_9ACTO rbh
threonine dehydratase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_22
Corynebacterium singulare, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26504..28039)
DNA (1536bp) protein (512aa)
Cryptic C4-dicarboxylate membrane transporter dcuD n=5 Tax=Corynebacterium pseudotuberculosis RepID=D9Q6A5_CORP1 rbh
yhcL; c4-dicarboxylate anaerobic carrier family protein
C4-dicarboxylate anaerobic carrier family protein {ECO:0000313|EMBL:AJI77940.1}; TaxID=161899 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Coryn rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_23
unknown

Not on your lists

comp(28039..28161)
DNA (123bp) protein (41aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_24
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28115..28843)
DNA (729bp) protein (243aa)
S51 family peptidase n=7 Tax=Propionibacterium RepID=M9VDT2_9ACTO rbh
S51 family peptidase
Uncharacterized protein {ECO:0000313|EMBL:ERS66388.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_25
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29098..29274)
DNA (177bp) protein (59aa)
50S ribosomal protein L32 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFA3_9ACTO
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
50S ribosomal protein L32
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_26
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29593..30234
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B5FA08
IMPACT family member yigz {ECO:0000313|EMBL:ENO17711.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_27
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30484..31425
DNA (942bp) protein (314aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sour rbh
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PG65_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_28
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31522..32130
DNA (609bp) protein (203aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:ENO17714.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ENO17714.1};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;"
Serine O-acetyltransferase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WC00_9ACTO
cysE; putative serine O-acetyltransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_29
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32276..32794
DNA (519bp) protein (173aa)
N-acetyltransferase Ats1 {ECO:0000313|EMBL:ENO17715.1}; EC=2.3.1.- {ECO:0000313|EMBL:ENO17715.1};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sou
hypothetical protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B6D99F
N-acetyltransferase GCN5
NECEvent2014_4_3_Actinomyces_59_538_scaffold_1_30
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33028..34905)
DNA (1878bp) protein (626aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367E442 rbh
carbohydrate-binding protein
Carbohydrate-binding protein {ECO:0000313|EMBL:ACQ79887.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC rbh
Displaying items 1-30 of 41 in total

View Taxonomy