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NECEvent2014_4_3_Actinomyces_59_538_scaffold_2

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_1
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(278..1099)
DNA (822bp) protein (274aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EFW10234.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EFW10234.1};; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" so rbh
Exodeoxyribonuclease III n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JGZ0_9ACTO rbh
exodeoxyribonuclease III
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_2
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1256..2263
DNA (1008bp) protein (336aa)
Cation diffusion facilitator family transporter n=2 Tax=Actinomyces RepID=U1SNU1_9ACTO rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERH33608.1}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp rbh
cation diffusion facilitator family transporter
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_3
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2280..3191)
DNA (912bp) protein (304aa)
folD; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Atopobium sp. ICM58 RepID=J3J7Y9_9ACTN rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.; rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_4
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3188..4480)
DNA (1293bp) protein (431aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM rbh
glycine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B32810 rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_5
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4683..5561)
DNA (879bp) protein (293aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=888050 species="Ba rbh
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6XC22_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_6
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5684..7012)
DNA (1329bp) protein (443aa)
Amidohydrolase n=1 Tax=Corynebacterium pyruviciproducens ATCC BAA-1742 RepID=S2YWF3_9CORY rbh
Amino acid amidohydrolase {ECO:0000313|EMBL:KGF06019.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;" rbh
amidohydrolase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_7
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7022..8521)
DNA (1500bp) protein (500aa)
Anaerobic C4-dicarboxylate uptake C (DcuC) family transporter n=1 Tax=Corynebacterium pyruviciproducens ATCC BAA-1742 RepID=S2ZXD3_9CORY rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF06020.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;" rbh
anaerobic c4-dicarboxylate antiporter, DcuC family
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_8
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8724..9713)
DNA (990bp) protein (330aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=883077 species="Bacteria; Ac rbh
malate dehydrogenase (EC:1.1.1.82)
Malate dehydrogenase n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0ZDY1_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_9
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9941..11089
DNA (1149bp) protein (383aa)
PPK2 family polyphosphate:nucleotide phosphotransferase n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQB7_9ACTO rbh
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:EJZ85676.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinom rbh
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_10
unknown

Not on your lists

11347..11553
DNA (207bp) protein (69aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_11
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11823..13565)
DNA (1743bp) protein (581aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R rbh
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
glucose-6-phosphate isomerase n=1 Tax=Actinomyces sp. ph3 RepID=UPI00031E85FC rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_12
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13614..15974)
DNA (2361bp) protein (787aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00016842}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00016842};; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" rbh
pfkL; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHB1_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_13
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16729..17946)
DNA (1218bp) protein (406aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulo rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A032_CELGA rbh
isocitrate dehydrogenase, NADP-dependent
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_14
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18334..18654)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002F71C36
Uncharacterized protein {ECO:0000313|EMBL:EKY15127.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_15
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18958..20460
DNA (1503bp) protein (501aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:CRH63433.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CRH63433.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila grou rbh
phosphate acetyltransferase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B2E74E rbh
phosphate acetyltransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20552..21757
DNA (1206bp) protein (402aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinom rbh
Acetate kinase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZAU3_9ACTO rbh
acetate kinase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_17
unknown

Not on your lists

21792..21947
DNA (156bp) protein (52aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21938..22363
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3D6B9
Uncharacterized protein {ECO:0000313|EMBL:ETI82060.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_19
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22424..23767)
DNA (1344bp) protein (448aa)
fucose permease n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B450E4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD30967.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b. rbh
major facilitator superfamily permease
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_20
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24067..25455)
DNA (1389bp) protein (463aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1219581 species="Bacteria; Acti rbh
fumarate lyase (EC:4.2.1.2)
aspartate ammonia-lyase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036DA9C7 rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_21
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25616..26659)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00037CC98D rbh
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AJF68964.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamen rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_22
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26989..30252
DNA (3264bp) protein (1088aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z6U4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ87939.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;" rbh
alkaline phosphatase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_23
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(30538..31662)
DNA (1125bp) protein (375aa)
Inosine-5`-monophosphate dehydrogenase {ECO:0000313|EMBL:CRH64256.1}; EC=1.-.-.- {ECO:0000313|EMBL:CRH64256.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamyd rbh
IMP dehydrogenase n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQG8_9ACTO rbh
inosine 5-monophosphate dehydrogenase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_2_24
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31871..32578
DNA (708bp) protein (236aa)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:ENO18767.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ENO18767.1};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomy rbh
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X5Y0_9ACTO rbh
Displaying 24 items

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