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NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_4

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(2026..2820)

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VGQ9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 199.0
  • Bit_score: 146
  • Evalue 3.80e-32
Transcriptional regulator {ECO:0000313|EMBL:CEG95048.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freuden similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 202.0
  • Bit_score: 207
  • Evalue 2.50e-50
tetR; Tetracycline repressor protein class H similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 197.0
  • Bit_score: 121
  • Evalue 2.80e-25

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCTGGTCAGCAGCTGTCTATCGCAGCGGAATTTGCGCGCTGACATGCTGGACGGTTGTCCCGACCTGTGTGCAACGAACGATGAGGAGGAAGGACTTGTGGGGCCTCCCCGTCGATACATCATGCAGAACGTGGACGACGACGGTATCGACGCACTGACCATGCGACGGCTCGGACGCGATCTCGGCGTCGATCCGATGATGATCTACCGGCATTTTTCCAACAAGGTGGCGGTGCTTGACGGCCTGATGGAGGTCATGTGGCGCGACGTCACCGTACCGGCAGCCGCCCAGACAACACCTTCGTGGCGCGAGCACCTGGTCGCTGTGATGCACACTTTGAGACGCGCATTGCTCAGACACCCTCGTGCCATCTCAATCGTCGGCACACGCCCCGCAACCGGACCGGAACTATTCGCCCTGATGGAACGCCTGCTGACGTCTCTCGCGGAGGCAGGAATGCCTGTGAACTCCCAGGCCGCCGACCAGCTGAACGCTCTGGTGAACTACACGGTTGGCCATGTCCTCGCAGAGGCGGGGGAGCCAGTGGGCGGCGAGGCCGACCAGATGAGCCACCAAACAGTACTTCCAGCCTCGTTTCCGCACCTCGCAGCCGTGTTCAACAGCGGGTGGCGCTACGATGCAGACCGTCAATACGACTATGCGCTGCGAGCAATGGTGTACGGCTGGAGCGAAGCTACGAGGGAGGCCGACGGCGCACTGACCGAGGGAAAGAGCACGAACGCCGAGGGTGGCGCGACTGCCTCGCAAGCCATGTTGGATGGACGCGACTGA
PROTEIN sequence
Length: 265
MLVSSCLSQRNLRADMLDGCPDLCATNDEEEGLVGPPRRYIMQNVDDDGIDALTMRRLGRDLGVDPMMIYRHFSNKVAVLDGLMEVMWRDVTVPAAAQTTPSWREHLVAVMHTLRRALLRHPRAISIVGTRPATGPELFALMERLLTSLAEAGMPVNSQAADQLNALVNYTVGHVLAEAGEPVGGEADQMSHQTVLPASFPHLAAVFNSGWRYDADRQYDYALRAMVYGWSEATREADGALTEGKSTNAEGGATASQAMLDGRD*