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NECEvent2014_4_3_Actinomyces_59_538_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_1
unknown

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_2
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(199..672)
DNA (474bp) protein (158aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFF80290.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFF80290.1};; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.
Antioxidant, AhpC/TSA family n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXX5_9ACTO
peroxiredoxin
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_3
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(781..1836)
DNA (1056bp) protein (352aa)
ABC transporter, ATP-binding protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X885_PROPF rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AFN47829.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibact rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_4
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2026..2820)
DNA (795bp) protein (265aa)
Putative TetR family transcriptional regulator n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6VGQ9_9MICO
Transcriptional regulator {ECO:0000313|EMBL:CEG95048.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freuden
tetR; Tetracycline repressor protein class H
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_5
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2878..4041)
DNA (1164bp) protein (388aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PLS3_9ACTO
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:EKY16332.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyce
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_6
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4211..5215)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGU0_BIFBR
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:KFI93171.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobact
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_7
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6073..7290)
DNA (1218bp) protein (406aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFB5_9ACTO rbh
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_8
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7287..8522)
DNA (1236bp) protein (412aa)
Aminotransferase, class V n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SMZ1_9ACTO rbh
Aminotransferase, class V {ECO:0000313|EMBL:ERH33288.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. rbh
aminotransferase class V, putative cysteine desulfurase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_9
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8519..9517)
DNA (999bp) protein (333aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W038_9ACTO rbh
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EEH63897.1}; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actin rbh
electron transfer flavoprotein subunit alpha
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_10
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9520..10338)
DNA (819bp) protein (273aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X2T2_9ACTO rbh
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:ENO17732.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiff rbh
Electron transfer flavoprotein alpha/beta-subunit
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_11
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10501..12855
DNA (2355bp) protein (785aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; A rbh
Glycogen debranching enzyme GlgX n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDM6_9ACTO rbh
putative isoamylase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_12
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..13948
DNA (1101bp) protein (367aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EJN45988.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EJN45988.1};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sou rbh
Tryptophan--tRNA ligase n=1 Tax=Actinomyces sp. ICM39 RepID=J3J554_9ACTO rbh
tryptophanyl-tRNA synthetase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_13
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14035..14757
DNA (723bp) protein (241aa)
membrane protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B57143
Membrane protein {ECO:0000313|EMBL:EEH63885.1}; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces coleocanis DSM 15436.;"
integral membrane protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_14
unknown

Not on your lists

14866..15585
DNA (720bp) protein (240aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_15
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15601..17970)
DNA (2370bp) protein (790aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomy rbh
Phosphorylase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X1P6_9ACTO rbh
glycogen phosphorylase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_16
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18199..20328
DNA (2130bp) protein (710aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alph rbh
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JLC0_9ACTO rbh
alpha amylase catalytic region
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_17
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20427..22241
DNA (1815bp) protein (605aa)
Trehalose synthase n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VXA7_9ACTO rbh
Trehalose synthase {ECO:0000313|EMBL:KGF02635.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;" rbh
trehalose synthase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_18
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22234..23643
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VVB9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD30736.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.
aminoglycoside phosphotransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_19
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23746..25935
DNA (2190bp) protein (730aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA rbh
glgB; 1,4-alpha-glucan branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JLB9_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_20
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26009..26527
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QLQ3_ARTGO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB13754.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12
Appr-1-p processing
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_21
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26590..27552)
DNA (963bp) protein (321aa)
Thioredoxin domain protein n=1 Tax=Actinomyces sp. ICM47 RepID=J0SUE2_9ACTO rbh
Thioredoxin domain protein {ECO:0000313|EMBL:EJG14589.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;" rbh
Thioredoxin domain protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_22
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27553..28566)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B37CD4
Uncharacterized protein {ECO:0000313|EMBL:ENO17743.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_23
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28563..30215)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z2Q7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ86424.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_24
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30369..30671)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SRJ7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC95311.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_25
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30714..32006)
DNA (1293bp) protein (431aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1227264 species rbh
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1R007_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_26
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31981..32679)
DNA (699bp) protein (233aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" so rbh
Endonuclease NucS n=1 Tax=Actinomyces sp. ICM47 RepID=J1LM14_9ACTO rbh
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_27
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32707..33129)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1SMX4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH33273.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_28
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33209..33472)
DNA (264bp) protein (88aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase F1 sector epsilon subunit {ECO:0000313|EMBL:EFU61699.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EFU61699.1};; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Act
ATP synthase F1 sector epsilon subunit n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KQL4_9ACTO
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_29
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33472..34920)
DNA (1449bp) protein (483aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet rbh
ATP synthase subunit beta n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B3C4DD rbh
ATP synthase subunit beta
NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_30
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34945..35871)
DNA (927bp) protein (309aa)
ATP synthase gamma chain n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 PF97_9ACTO">RepID=L1PF97_9ACTO rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1127 rbh
ATP synthase F0F1 subunit gamma
Displaying items 1-30 of 193 in total

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