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NECEvent2014_4_3_Actinomyces_59_538_scaffold_12_11

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 10501..12855

Top 3 Functional Annotations

Value Algorithm Source
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; A similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 770.0
  • Bit_score: 980
  • Evalue 1.90e-282
  • rbh
Glycogen debranching enzyme GlgX n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDM6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 762.0
  • Bit_score: 966
  • Evalue 2.00e-278
  • rbh
putative isoamylase similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 749.0
  • Bit_score: 752
  • Evalue 1.70e-214

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Taxonomy

Actinomyces sp. S6-Spd3 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2355
ATGGATAGTAAAAGAAACATGGTGCCCAGCTCCGATCACGACTTCGCCGCTCCTGCACCGCGCATCCCCTCACCGAATCCCACACCTCGCCGGATCGGAGTGTATGCGCGTGAAGGCGGAATCGACGTTGCTGTTGTGGCGCGCCATGCGACGCGCGTGGATCTGTGCATCCTGGCAGATGACGGTACGGCACATGAAAAGCGCTGGTCATTGCTCGGACCCGAAGACGGAATCTGGCATGGGCACCTGGACGGCGCAGGCCTGGGAACGCACTACGGTTTCCGAGTCCACGGCCCGTGGGATCCTGACGCCGCAATGTTTCACAATCCGGCAAAACTTTTGCTGGACCCCTATGGGTGCGGCCTAGCCGGTTCGGTCCAGATGGGGGCTGCCGTTCACGCGCACACCGTTGACGAGGACCTGTACCCGGCAACCTATCCGCTGGAAAAGTCTGACCTGAACTCAGCACCCTACATGCCGCACTCGGTTGTCGTGTCCACGCAGTTCGACATTGCCGACAAACCGCGCACACCGTGGGACCAGACCGTGATCTATGAGCTGCACGTCAAGGGCTTCACGCTCAATATGCCTGACATTCCGGATGACCTGCGGGGAACTTACGCAGGACTGGCGCACCCCGCAGCGGTGGACTATCTGAAGAAGCTGGGCATCACGGCTGTGGAATTGCTGCCCATCCACGCCAAACACGATGAGACGTTCCTGATTGAGCGCGGGTTGACGAATTATTGGGGTTATTCGACGCTGTCGTTCTTTGCCCCTGAACCGTCGTACGCTACCGAGGCTGCACGCAGGCGCGGCGCTCAGGGTGTGATTGATGAGTTCCGAGGCATGGTGTCGATCCTGCATCAGGCCGACATCGAGGTGCTTCTGGACGTGGTCTATAACCACACATGCGAAGGGTCGGAAACGGGATCGACACTGTCGTGGAGCGGTTTTGATGCACCGCTGTACTATCGATTCGATCATGGGCGCCCTCGTCGCATGATCGACGTGACGGGAACGGGCAACTCGCTGAACACGGACGAGCCACTGGCCATGAAAATGGTGCTGGATTCACTGCGCTACTGGTCGCGCGAAATGGGGATCGATGGCTTCCGCTTCGATCTGGCGGCCACGCTTGGACGCTTCTCAACGGGCTTTGCGCCGATGCACCCTCTGCTTATCGGGATCGGAACCGATGAGGACCTGTGCCAGGACAAGCTCATTGCCGAGCCGTGGGACATTGGCCCGGGCGGGTGGCAGACCGGTAATTTCCCCTCACCATTTTCTGAGTGGAATGATCGTTACCGCGACACGGTGCGCGAGTTCTGGCTTTCCGATTTCAGGTCCCTGGCAATGGGTCGCGGTGCGATCGGCCCGATGAAGCTGGCCACACGCGTGTCCGGCTCTTCTGATCTGTTTGCTCACGGTGGTCACCGTTTTGACGGACCGCGGCGCTCCGTGAATTTCGTGACAGCTCACGACGGGTTCACCCTGGCTGACCTGACCGCTTTTGATCACAAACACAACATGGCGAACCTGGAACAGAACCGCGATGGTACGACGAATAATCATTCGTGGAACCACGGCATCGAAGGCACTATTGCGCAGACTCCGGTCGATGACGCTCACGACGCGCTGAACGGGTCGCCTGTCAGTTCTGACTTCCTGCAGGACATTTACCCCACGCGTCACAGGAGCCAGCGCAATTTGCTGACGACGCTGCTCACCTCGTCTGGTACTCCGATGATTGTGGCGGGCGATGAGTTTCAGCGCACGCAGTTCGGCAATAACAACGCTTACTGCCAGGACTCTCCCATCTCATGGATCGATTGGAACATGTCGGACTCGCAGAAGCAGCAGCTTGCCACTGTTCGCTGGCTGCTGGCCCTGCGACGTCATCATCCGGTCTTGCGTCCCTCCCTTTTCGCAGATGGCAGGATAGCTGAGGGCGATGTCATAGCCGATCTGGGGTGGTTTGATCGTGACGCTCACGACATTGCGCAGGATGGCTGGGCTCAGGAGCACAACCGTGTCTTCCAGATGCTCCGTTCGGGGTATCAGCTGGGTGACCGCGACGCCCTCGTTGTGGTGAATGGAACATTGGATGTTGCCACGGTTCGTCTGGTGAGCGGGCGCGGCTCTGACTGGTACGTCGTCATGGATACCTCCTGGTCGTGCCCTTCCGATGGCGGTATCAACGTCGAGGGAGACATCGAGCGCCTGGAACGCGGGCTTCCTGACAGACTGGAAGTTGTCCGTTGTGGGGACGAAGTGACGATCGAGCCACAGTCCGTGATCGTCATGTTGTCAGCACGCACCCCTCATCATTCGGTAGACTACGGGCGTGACTAG
PROTEIN sequence
Length: 785
MDSKRNMVPSSDHDFAAPAPRIPSPNPTPRRIGVYAREGGIDVAVVARHATRVDLCILADDGTAHEKRWSLLGPEDGIWHGHLDGAGLGTHYGFRVHGPWDPDAAMFHNPAKLLLDPYGCGLAGSVQMGAAVHAHTVDEDLYPATYPLEKSDLNSAPYMPHSVVVSTQFDIADKPRTPWDQTVIYELHVKGFTLNMPDIPDDLRGTYAGLAHPAAVDYLKKLGITAVELLPIHAKHDETFLIERGLTNYWGYSTLSFFAPEPSYATEAARRRGAQGVIDEFRGMVSILHQADIEVLLDVVYNHTCEGSETGSTLSWSGFDAPLYYRFDHGRPRRMIDVTGTGNSLNTDEPLAMKMVLDSLRYWSREMGIDGFRFDLAATLGRFSTGFAPMHPLLIGIGTDEDLCQDKLIAEPWDIGPGGWQTGNFPSPFSEWNDRYRDTVREFWLSDFRSLAMGRGAIGPMKLATRVSGSSDLFAHGGHRFDGPRRSVNFVTAHDGFTLADLTAFDHKHNMANLEQNRDGTTNNHSWNHGIEGTIAQTPVDDAHDALNGSPVSSDFLQDIYPTRHRSQRNLLTTLLTSSGTPMIVAGDEFQRTQFGNNNAYCQDSPISWIDWNMSDSQKQQLATVRWLLALRRHHPVLRPSLFADGRIAEGDVIADLGWFDRDAHDIAQDGWAQEHNRVFQMLRSGYQLGDRDALVVVNGTLDVATVRLVSGRGSDWYVVMDTSWSCPSDGGINVEGDIERLERGLPDRLEVVRCGDEVTIEPQSVIVMLSARTPHHSVDYGRD*