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NECEvent2014_4_3_Actinomyces_59_538_scaffold_19_15

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(16112..16432)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1RMS8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 106.0
  • Bit_score: 180
  • Evalue 7.30e-43
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 106.0
  • Bit_score: 180
  • Evalue 1.00e-42
50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 105.0
  • Bit_score: 148
  • Evalue 1.10e-33

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Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGAGCTCCAACGTGGTCTACGCGATCGTCAAGGCCGGCGGCCGACAAGAAAAGGTGTCCGTCGGAGACGTCGTAGTCGTCGATAAGCTGGCCGATGAAATCGGATCCAGCATTGAACTCCAGCCACTGATGCTGGTCGACGGCGACGCCGTCACCACTGATAAAGATGGACTATCAAAGGTCTCCGTTAAGGCTGAGGTCATCGACGCGACCAAAGGTCCGAAGATCTCCATCGTCAAATTCAAGAACAAGACTGGCTACCGTAAGCGTCAAGGTCACCGGCAGAAGCAGTCGGTCATCAAGATCACCGAGATCGCCTGA
PROTEIN sequence
Length: 107
MSSNVVYAIVKAGGRQEKVSVGDVVVVDKLADEIGSSIELQPLMLVDGDAVTTDKDGLSKVSVKAEVIDATKGPKISIVKFKNKTGYRKRQGHRQKQSVIKITEIA*