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NECEvent2014_4_3_Actinomyces_59_538_scaffold_19_16

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(16603..19098)

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein (Fragment) n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QZG2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 840.0
  • Bit_score: 906
  • Evalue 2.00e-260
  • rbh
S1 RNA binding domain protein {ECO:0000313|EMBL:ERH32755.1}; Flags: Fragment;; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 840.0
  • Bit_score: 906
  • Evalue 2.80e-260
  • rbh
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 859.0
  • Bit_score: 787
  • Evalue 4.90e-225

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Taxonomy

Actinomyces sp. oral taxon 172 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2496
ATGGTGCGTGTGGATCCCCTCCAAAATTGGAGAAAAGTGACAACGACCGAACACGAGGGATCGGCAGCACACGTGCCTGCCGCCTCCCTGCTATTTCAAGCGCCGACTTTTACCGAGCCGGCTCCCGCACCATCCCGCTCGGACGATTCGACATCATCGCAGGACTCGTCCGAGGAATCACCCCGACGCTCACGCTCGCGTCAAAAAAATAAGGGCAAGGACAAGGACTCCTCGCAGTCCCAGGACGACGGCAAAGGTAAGAACAGGAAAGGCAAGTCCTCCTCTTCCAAGTCATCGTCTGGAAAGTCTGGCACGCAGGGCAGCTCCGACGACAATGCCGACAATTCGGGTGAGAGCAACTCCGGTAAGAAGGACCGCAAGCAGGACTCCGGGAAATCACAGCGCTCAAGGAAGTCTTCCCGCAAGTCGGCAGAGCCAGATTTGACGTCAGATTCCGCAGATTCTCAGGATTCGTCTGCGCAGGACGGTGATTCTGCTCCCTCCGAGTCAGAATCGTCCGAGGGATCTTCACGCCGTCGTCGCCGCCGGCGTTCACGCTCGCAGTCCGGTGATTCCTCTGACAGCAACGATCAGGTCACCGCGCTGAAGGGATCAACTCGCCTGGAGGCGAAGAAACAGCGTCGCCGTGAGGGTCGCCGCGATGGCCGCCGACGTCACACGATCACCGAATCGGAGTTCCTGGCGCGGCGCGAGTCAGTCACCCGCAAGATGATCATTCGCCAGCATAACGGCCTTGATCAGATCGCAGTGATCGAAGATGACCTGCTGGTCGAGCATTACGTGGCTCGACGCACCCACCAGACAATGGTCGGCAACATCTACCTGGGTCGCGTCCAGAACGTCTTGCCGTCGATGGAAGCTGCGTTCATTGATATTGGCCGAGGCCGAAATGCCGTACTGTATGCCGGTGAGGTCAACTGGGATGCCGTGGGCCTGGAAGGTCGCCCTCGTCGAATTGAATCGGCACTCAAGTCCGGTGACGCGGTGCTGGTGCAGGTCACCAAAGACCCGATCGGCCACAAGGGTGCCCGCCTGACCAGCCAGATCACGCTGGCCGGACGCTACCTCGTCTTCATTCCGCACGGCTCCATGATGGGTATTTCCCGCAAGCTGCCAGAATCTGAACGAGGACGCCTGAAGAAAGTCCTCAAGAAGGTCATGCCGGCCGGAGCCGGTGTTATTGTTCGCACCGCGGCCGAAGGTGCGTCCGAAGAACAGCTCGTTGCCGATGTTGAGCGCCTGTCGAAGCAGTGGGACGACATCACCAAGCGTGAGAAGAACACGAAGTCGGCCCCGACGCTGGTGCGCGGCGAGCCCGAACTGGCTGTCCGCGTCGTGCGTGACATCTTCAACGAAGATTTCGCTCAGCTGATTATTCAGGGCAAGGACACGTATCACACAGTCAGCACATACGTCGAAGAGCTGTCGCCTGAACTGTCTGACCGCGTCGAACAGTGGGTCGGCACGAATGACGTCTTCGCTGAGTTCCGCGTCGATGAACAGCTGGCCAAGGGCATGGACCGCAAGGTGTGGCTGCCCAGCGGCGGCACGCTGATTATTGACCGCACCGAAGCGATGACGGTGATCGACGTCAACACCGGCAAGTACATTGGTGCCGGCGGCACGCTGGAAGAAACCGTCACGCGCAACAACCTGGAGGCCGCTGAAGAGATCGTGCGTCAGCTGCGTCTGCGTGACATCGGCGGCATCATCATCATCGACTTTGTCGATATGGTGCTTGAATCCAACCGTGACCTCGTCCTGCGCCGCCTGGTTGAGTGCCTGGGACGTGACCGCACTCGCCACCAGGTCACTGAGATCACCTCGCTGGGTCTGGTGCAGATGACGCGTAAGCGCGTGGGGGAGGGCCTTGTTGAAGCATTCTCCACACCGTGTGAGGCCTGCGAAGGCAAGGGCTTCATCGTGCACACTCACCCCGTGGAAACGCCTGGCGCGGATCCTGCCTCGCACAGCAACAACAAGCAGAAGGGCCGTTCCAGGCGAGAGACGAAGAATAACGAGGATGGCCCCGGCTCCAAGCGTGCGCGTGAAGCGCTGAATGCCATCGCGGCGGCAGCGAGCCACGCACACGAAAAAGATCAGGAAGATAGCCAGGACAGCCAGGACAGCCAGGGCGGTCAGGATGGTCAGGGCGGTCCAAACGATCAGCCTGCGGCGTCCGCCGAAACCGAACAGACCAAGGCTGCCAGTGAACAGGACAAGCCCGCTCAGCCGAGGAGACGTCGGCGCGTGTCGACCGGAAAGACGGTCGAGCCGGAACCGGTGACTCCCACCCCGGAGCCGACACCGGAGCCTATTTTGGAGCCCGAACCGGCCGATGAGCAGCCCGAACGTCATCGCGCGGTGACTTCGCTGGATGATATTCAGTTGCCAGATGCCGCGAAACGCTCCACACCTACACGACGTCGCCGCCGGGTGGCATCGCGTGGCGTCATTGAGCCTTCAGCGTCCTAA
PROTEIN sequence
Length: 832
MVRVDPLQNWRKVTTTEHEGSAAHVPAASLLFQAPTFTEPAPAPSRSDDSTSSQDSSEESPRRSRSRQKNKGKDKDSSQSQDDGKGKNRKGKSSSSKSSSGKSGTQGSSDDNADNSGESNSGKKDRKQDSGKSQRSRKSSRKSAEPDLTSDSADSQDSSAQDGDSAPSESESSEGSSRRRRRRRSRSQSGDSSDSNDQVTALKGSTRLEAKKQRRREGRRDGRRRHTITESEFLARRESVTRKMIIRQHNGLDQIAVIEDDLLVEHYVARRTHQTMVGNIYLGRVQNVLPSMEAAFIDIGRGRNAVLYAGEVNWDAVGLEGRPRRIESALKSGDAVLVQVTKDPIGHKGARLTSQITLAGRYLVFIPHGSMMGISRKLPESERGRLKKVLKKVMPAGAGVIVRTAAEGASEEQLVADVERLSKQWDDITKREKNTKSAPTLVRGEPELAVRVVRDIFNEDFAQLIIQGKDTYHTVSTYVEELSPELSDRVEQWVGTNDVFAEFRVDEQLAKGMDRKVWLPSGGTLIIDRTEAMTVIDVNTGKYIGAGGTLEETVTRNNLEAAEEIVRQLRLRDIGGIIIIDFVDMVLESNRDLVLRRLVECLGRDRTRHQVTEITSLGLVQMTRKRVGEGLVEAFSTPCEACEGKGFIVHTHPVETPGADPASHSNNKQKGRSRRETKNNEDGPGSKRAREALNAIAAAASHAHEKDQEDSQDSQDSQGGQDGQGGPNDQPAASAETEQTKAASEQDKPAQPRRRRRVSTGKTVEPEPVTPTPEPTPEPILEPEPADEQPERHRAVTSLDDIQLPDAAKRSTPTRRRRRVASRGVIEPSAS*