ggKbase home page

NECEvent2014_4_3_scaffold_14

Alias: 174_003_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_14_trna_1
unknown

Not on your lists

108..181
DNA (74bp)
transferRNA
NECEvent2014_4_3_scaffold_14_trna_2
unknown

Not on your lists

190..262
DNA (73bp)
transferRNA
NECEvent2014_4_3_scaffold_14_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

403..915
DNA (513bp) protein (171aa)
Transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QV20_CLOBU rbh
Transcriptional repressor for NAD biosynthesis in gram-positive {ECO:0000313|EMBL:KJZ92178.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
niaR; transcription repressor NiaR
NECEvent2014_4_3_scaffold_14_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

928..2334
DNA (1407bp) protein (469aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K172_CLOBU rbh
Dehydrogenase {ECO:0000313|EMBL:KHD15092.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
FAD dependent oxidoreductase
NECEvent2014_4_3_scaffold_14_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2355..2585
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QV22_CLOBU
No significant {ECO:0000313|EMBL:KJZ84718.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_3_scaffold_14_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3007..4287
DNA (1281bp) protein (427aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:KJZ84666.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KJZ84666.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Seryl-tRNA synthetase n=4 Tax=Clostridium butyricum RepID=B1QV23_CLOBU rbh
SerS; seryl-tRNA synthetase
NECEvent2014_4_3_scaffold_14_trna_3
unknown

Not on your lists

4547..4634
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_14_trna_4
unknown

Not on your lists

4683..4770
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_14_trna_5
unknown

Not on your lists

5110..5197
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_14_trna_6
unknown

Not on your lists

5231..5318
DNA (88bp)
transferRNA
NECEvent2014_4_3_scaffold_14_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5494..5997
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=2 Tax=Clostridium butyricum RepID=M8JFV1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96155.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
GNAT family acetyltransferase
NECEvent2014_4_3_scaffold_14_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6016..9483
DNA (3468bp) protein (1156aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.
addB; ATP-dependent helicase/deoxyribonuclease subunit B (EC:3.1.-.- 3.6.4.12)
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC58_CLOBU rbh
NECEvent2014_4_3_scaffold_14_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..13293
DNA (3759bp) protein (1253aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {E
addA; ATP-dependent helicase/nuclease subunit A (EC:3.1.-.- 3.6.4.12)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K166_CLOBU rbh
NECEvent2014_4_3_scaffold_14_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13399..14580)
DNA (1182bp) protein (394aa)
ErfK/YbiS/YcfS/YnhG family protein n=2 Tax=Clostridium butyricum RepID=B1QV27_CLOBU rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EEP52560.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
putative L,D-transpeptidase
NECEvent2014_4_3_scaffold_14_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14788..15585
DNA (798bp) protein (266aa)
UPI00039A38E2 related cluster n=1 Tax=unknown RepID=UPI00039A38E2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91721.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_14_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15723..16943)
DNA (1221bp) protein (407aa)
Sodium:dicarboxylate symporter family protein n=3 Tax=Clostridium butyricum RepID=C4IMD5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91725.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sodium:dicarboxylate symporter family protein rbh
NECEvent2014_4_3_scaffold_14_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17276..18160
DNA (885bp) protein (295aa)
Periplasmic sensor signal transduction histidine kinase n=3 Tax=Clostridium butyricum RepID=B1R229_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84665.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
histidine kinase
NECEvent2014_4_3_scaffold_14_trna_7
unknown

Not on your lists

18330..18401
DNA (72bp)
transferRNA
NECEvent2014_4_3_scaffold_14_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18571..19707
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K161_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29685.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_3_scaffold_14_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19753..20646)
DNA (894bp) protein (298aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=632245
psd1; phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9A0_CLOBU rbh
NECEvent2014_4_3_scaffold_14_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20925..21497
DNA (573bp) protein (191aa)
Transcriptional regulator, TetR family n=4 Tax=Clostridium butyricum RepID=B1R218_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, TetR family
NECEvent2014_4_3_scaffold_14_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21657..23381
DNA (1725bp) protein (575aa)
iron hydrogenase 1 (EC:1.12.7.2)
Hydrogenase-1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFU1_CLOBU rbh
Hydrogenase-1 {ECO:0000313|EMBL:EEP52487.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;
NECEvent2014_4_3_scaffold_14_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23610..24407
DNA (798bp) protein (266aa)
Cof-like hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPZ8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84695.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
HAD family hydrolase
NECEvent2014_4_3_scaffold_14_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24448..26037)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K157_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter ATP-binding protein
NECEvent2014_4_3_scaffold_14_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26235..27935)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K996_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29679.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_3_scaffold_14_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27938..28531)
DNA (594bp) protein (198aa)
UPI0003D5D045 related cluster n=1 Tax=unknown RepID=UPI0003D5D045 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97170.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_14_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28754..29401
DNA (648bp) protein (216aa)
Hemolysin-3 n=4 Tax=Clostridium butyricum RepID=B1R212_CLOBU rbh
Hemolysin-3 {ECO:0000313|EMBL:EEP52515.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hemolysin III family channel protein
NECEvent2014_4_3_scaffold_14_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29465..30730)
DNA (1266bp) protein (422aa)
UPI0003D651D0 related cluster n=1 Tax=unknown RepID=UPI0003D651D0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ29676.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
NECEvent2014_4_3_scaffold_14_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31065..31877
DNA (813bp) protein (271aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
proB; glutamate 5-kinase ProB (EC:2.7.2.11)
Glutamate 5-kinase n=4 Tax=Clostridium butyricum RepID=B1R210_CLOBU rbh
NECEvent2014_4_3_scaffold_14_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31983..33227
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K992_CLOBU rbh
Displaying items 1-30 of 113 in total

View Taxonomy