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NECEvent2014_4_3_scaffold_122

Alias: 174_003_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_122_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(450..647)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWL7_CLOBA
Uncharacterised protein {ECO:0000313|EMBL:CEO21151.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK35232.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
hypothetical protein
NECEvent2014_4_3_scaffold_122_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(778..942)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWL7_CLOBA
Uncharacterised protein {ECO:0000313|EMBL:CEO21151.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK35232.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
hypothetical protein
NECEvent2014_4_3_scaffold_122_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1531..1944)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003674F39
Uncharacterized protein {ECO:0000313|EMBL:KJZ91085.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
preprotein translocase subunit SecB
NECEvent2014_4_3_scaffold_122_4
unknown

Not on your lists

comp(1947..2213)
DNA (267bp) protein (89aa)

This feature has no annotations

NECEvent2014_4_3_scaffold_122_5
Geobacillus sp. WCH70, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2225..2737)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D936_GEOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS25889.1}; TaxID=471223 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain WCH70).;"
NECEvent2014_4_3_scaffold_122_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3127..3963)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCT2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKQ57733.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
NECEvent2014_4_3_scaffold_122_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4136..4384)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDF1_FLUTR
Restriction endonuclease {ECO:0000313|EMBL:KIL07347.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4709..5323)
DNA (615bp) protein (205aa)
UPI0003D5FEA7 related cluster n=1 Tax=unknown RepID=UPI0003D5FEA7 rbh
Resolvase {ECO:0000313|EMBL:ETI91891.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
putative site-specific recombinase
NECEvent2014_4_3_scaffold_122_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5645..6322)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYT2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:KJZ91052.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_3_scaffold_122_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6593..7453)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum CFSAN002367 RepID=S8B284_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ91084.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7530..7676)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRQ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI91885.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8028..8333)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABI7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30114.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8354..9772)
DNA (1419bp) protein (473aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0V0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91060.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
melibiose:sodium symporter
NECEvent2014_4_3_scaffold_122_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9806..12823)
DNA (3018bp) protein (1006aa)
beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADA9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91053.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_3_scaffold_122_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13009..13848
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR91_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91092.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator
NECEvent2014_4_3_scaffold_122_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14166..14696)
DNA (531bp) protein (177aa)
UPI0003D66637 related cluster n=1 Tax=unknown RepID=UPI0003D66637 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91073.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14754..14900)
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI88391.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_3_scaffold_122_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14872..16356)
DNA (1485bp) protein (495aa)
UPI0003D5C1EC related cluster n=2 Tax=unknown RepID=UPI0003D5C1EC rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91059.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16371..16514)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0U3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91081.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_122_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16527..16667)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADA4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI88394.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_3_scaffold_122_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16667..16900)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YR84_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30106.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_3_scaffold_122_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17102..17413)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30105.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Domain of unknown function (DUF955).
NECEvent2014_4_3_scaffold_122_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17425..17547)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91083.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_3_scaffold_122_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17663..17797)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI88398.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_3_scaffold_122_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17807..19150)
DNA (1344bp) protein (448aa)
UPI0003D5A349 related cluster n=1 Tax=unknown RepID=UPI0003D5A349 rbh
TOPRIM protein {ECO:0000313|EMBL:ETI88399.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
TOPRIM domain protein
NECEvent2014_4_3_scaffold_122_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19167..19508)
DNA (342bp) protein (114aa)
UPI0003D5C6D1 related cluster n=1 Tax=unknown RepID=UPI0003D5C6D1
Phage replication initiation protein {ECO:0000313|EMBL:ETI88400.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
hypothetical protein
NECEvent2014_4_3_scaffold_122_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19475..19852)
DNA (378bp) protein (126aa)
DNA replication protein n=1 Tax=Clostridium tunisiense RepID=UPI000306F58A
DNA replication protein {ECO:0000313|EMBL:CCY30032.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia in
hypothetical protein
NECEvent2014_4_3_scaffold_122_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19957..20250)
DNA (294bp) protein (98aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A0S9_CLOBU
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:ENZ30098.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
hypothetical protein
NECEvent2014_4_3_scaffold_122_29
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20446..20652)
DNA (207bp) protein (69aa)
Transcriptional regulator, XRE family n=2 Tax=Clostridium RepID=U5RYF2_9CLOT
DNA-binding protein {ECO:0000313|EMBL:KAJ52877.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
transcriptional regulator, XRE family
NECEvent2014_4_3_scaffold_122_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20816..21568
DNA (753bp) protein (251aa)
UPI0003D5E249 related cluster n=1 Tax=unknown RepID=UPI0003D5E249 rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ETI88401.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
phage transcriptional regulator
Displaying items 1-30 of 40 in total

View Taxonomy