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NECEvent2014_4_3_scaffold_140

Alias: 174_003_scaffold_140

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_140_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60..1505
DNA (1446bp) protein (482aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KI18_CLOBU rbh
HD-GYP domain {ECO:0000313|EMBL:KJZ85249.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase and metal dependent phosphohydrolase
NECEvent2014_4_3_scaffold_140_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1778..2044
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QWG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97838.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_140_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2099..4555
DNA (2457bp) protein (819aa)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTF9_CLOBU rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ENZ30891.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
heavy metal translocating P-type ATPase
NECEvent2014_4_3_scaffold_140_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4608..4814
DNA (207bp) protein (69aa)
Copper-transporting ATPase 1 n=4 Tax=Clostridium butyricum RepID=B1QWF9_CLOBU
Copper chaperone {ECO:0000313|EMBL:KJZ85264.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
copper chaperone
NECEvent2014_4_3_scaffold_140_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4965..6170)
DNA (1206bp) protein (402aa)
Dhha1 domain protein n=3 Tax=Clostridium butyricum RepID=B1QWF8_CLOBU rbh
Threonyl/alanyl tRNA synthetase, SAD {ECO:0000313|EMBL:EEP55941.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
alaXL; alanyl-tRNA editing protein AlaX-L
NECEvent2014_4_3_scaffold_140_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6497..7009
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KI23_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:KJZ85256.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_3_scaffold_140_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7173..8438
DNA (1266bp) protein (422aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium butyricum RepID=M8K9U2_CLOBU rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ85243.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
methyl-accepting chemotaxis sensory transducer
NECEvent2014_4_3_scaffold_140_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8581..9513)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNC2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85280.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_3_scaffold_140_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9506..10291)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWR8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55923.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_3_scaffold_140_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11024..11701
DNA (678bp) protein (226aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=2 Tax=Clostridium butyricum RepID=B1QWR6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85241.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
enzyme with TIM-barrel fold
NECEvent2014_4_3_scaffold_140_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12369..13664
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase LysA (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KI28_CLOBU rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
NECEvent2014_4_3_scaffold_140_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14141..14707
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Signal peptidase I n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9U5_CLOBU rbh
signal peptidase I
NECEvent2014_4_3_scaffold_140_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14879..15445
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Signal peptidase I n=2 Tax=Clostridium butyricum RepID=M8JNC7_CLOBU rbh
signal peptidase I
NECEvent2014_4_3_scaffold_140_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15553..16101
DNA (549bp) protein (183aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=4 Tax=Clostridium butyricum RepID=B1QWR2_CLOBU rbh
NECEvent2014_4_3_scaffold_140_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16277..16495
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE63_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30879.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_3_scaffold_140_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16523..18670
DNA (2148bp) protein (716aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ftsH2; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A313_CLOBU rbh
NECEvent2014_4_3_scaffold_140_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18927..21104
DNA (2178bp) protein (726aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFI0_CLOBU rbh
helicase rbh
NECEvent2014_4_3_scaffold_140_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21651..22469
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTE5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97816.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
extracellular solute-binding protein
NECEvent2014_4_3_scaffold_140_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22751..23410
DNA (660bp) protein (220aa)
Glutamine ABC transporter, permease/substrate-binding protein n=3 Tax=Clostridium butyricum RepID=B1QWQ7_CLOBU rbh
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EEP55766.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
amino acid ABC transporter substrate-binding protein/permease
NECEvent2014_4_3_scaffold_140_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23397..24119
DNA (723bp) protein (241aa)
Glutamine transport ATP-binding protein GlnQ n=4 Tax=Clostridium butyricum RepID=B1QWQ6_CLOBU rbh
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:EEP55856.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bu
artM; arginine transport ATP-binding protein ArtM
NECEvent2014_4_3_scaffold_140_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24509..26563
DNA (2055bp) protein (685aa)
pepO2; neutral endopeptidase PepO (EC:3.4.24.-)
Endothelin-converting enzyme 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KI39_CLOBU rbh
Endopeptidase O {ECO:0000313|EMBL:KJZ85080.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_3_scaffold_140_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26627..27802)
DNA (1176bp) protein (392aa)
Cation diffusion facilitator family transporter n=2 Tax=Clostridium butyricum RepID=M8K9V5_CLOBU rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ENZ30872.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
cation diffusion facilitator family transporter
NECEvent2014_4_3_scaffold_140_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28256..29140
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA3; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Clostridium butyricum RepID=M8JND5_CLOBU rbh
NECEvent2014_4_3_scaffold_140_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29556..29966
DNA (411bp) protein (137aa)
Hdig domain protein n=2 Tax=Clostridium butyricum RepID=B1QWQ2_CLOBU
Hdig domain protein {ECO:0000313|EMBL:EEP55907.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL
hypothetical protein
NECEvent2014_4_3_scaffold_140_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30037..30879
DNA (843bp) protein (281aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=4 Tax=Clostridium butyricum RepID=B1QWQ1_CLOBU rbh
NECEvent2014_4_3_scaffold_140_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30937..31749
DNA (813bp) protein (271aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A304_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89161.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_3_scaffold_140_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32123..32299
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFH1_CLOBU
Mobile element protein {ECO:0000313|EMBL:KJZ85108.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 27 items

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