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NECEvent2014_4_3_scaffold_224

Alias: 174_003_scaffold_224

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_224_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89..796
DNA (708bp) protein (236aa)
Transcriptional regulator, DeoR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KDU5_CLOBU rbh
Glycerol-3-phosphate regulon repressor, DeoR family {ECO:0000313|EMBL:KJZ86803.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
DeoR-family transcriptional regulator
NECEvent2014_4_3_scaffold_224_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1081..2703)
DNA (1623bp) protein (541aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=997898 species="Bacteria; Firmicutes;
Cardiolipin synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQX3_CLOBU rbh
phospholipase D/transphosphatidylase
NECEvent2014_4_3_scaffold_224_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2968..6489
DNA (3522bp) protein (1174aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFL4_CLOBU rbh
NECEvent2014_4_3_scaffold_224_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7177..8052
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASX3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35142.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
response regulator
NECEvent2014_4_3_scaffold_224_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8034..8489
DNA (456bp) protein (152aa)
CheX protein n=4 Tax=Clostridium butyricum RepID=B1QV45_CLOBU
Chemotaxis protein CheX {ECO:0000313|EMBL:KJZ86813.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cheX; chemotaxis protein CheX
NECEvent2014_4_3_scaffold_224_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8610..9074)
DNA (465bp) protein (155aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
ogt; methylated-DNA--protein-cysteine methyltransferase, constitutive (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Clostridium butyricum RepID=M8KDV1_CLOBU rbh
NECEvent2014_4_3_scaffold_224_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9226..10680)
DNA (1455bp) protein (485aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Surface protective antigen SpaC n=2 Tax=Clostridium butyricum RepID=B1QV43_CLOBU rbh
glycoside hydrolase family 25
NECEvent2014_4_3_scaffold_224_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10919..11236
DNA (318bp) protein (106aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFK6_CLOBU
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENZ35138.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
ArsR family transcriptional regulator
NECEvent2014_4_3_scaffold_224_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11324..11698
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASW5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35137.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Arsenical resistance operon trans-acting repressor ArsD
NECEvent2014_4_3_scaffold_224_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11755..13503
DNA (1749bp) protein (583aa)
arsA; arsenical pump-driving ATPase ArsA (EC:3.6.3.16)
Arsenite-activated ATPase ArsA n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z5K2_CLOBU rbh
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ENZ35136.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
NECEvent2014_4_3_scaffold_224_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13542..13946
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35135.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein tyrosine phosphatase
NECEvent2014_4_3_scaffold_224_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14219..14431
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QV38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53293.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_4_3_scaffold_224_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14503..15837
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AFK0_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ35133.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
MATE efflux family protein
NECEvent2014_4_3_scaffold_224_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15915..16022
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI87896.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_3_scaffold_224_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15967..18231
DNA (2265bp) protein (755aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=140
DNA topoisomerase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASV7_CLOBU rbh
DNA topoisomerase III
NECEvent2014_4_3_scaffold_224_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18349..19158)
DNA (810bp) protein (270aa)
Cof-like hydrolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z5J3_CLOBU rbh
Hydrolase (HAD superfamily) in cluster with DUF1447 {ECO:0000313|EMBL:KJZ86857.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
HAD-superfamily hydrolase, subfamily IIB
NECEvent2014_4_3_scaffold_224_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19335..20099
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=3 Tax=Clostridium butyricum RepID=B1QV34_CLOBU rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEP54714.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
transcriptional regulator of sugar metabolism
Displaying 17 items

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