ggKbase home page

NECEvent2014_4_3_scaffold_250

Alias: 174_003_scaffold_250

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_250_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..137
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 5521 RepID=B1R1W2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85000.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_3_scaffold_250_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

319..2616
DNA (2298bp) protein (766aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=2 Tax=Clostridium butyricum RepID=M8JFP9_CLOBU rbh
NECEvent2014_4_3_scaffold_250_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2632..3648
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2K7_CLOBU rbh
ComF operon protein A, DNA transporter ATPase {ECO:0000313|EMBL:KJZ84454.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
superfamily II DNA/RNA helicase required for DNA uptake
NECEvent2014_4_3_scaffold_250_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3621..4286
DNA (666bp) protein (222aa)
ComF family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUV2_CLOBU rbh
ComF family protein {ECO:0000313|EMBL:ENZ31200.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ComF protein
NECEvent2014_4_3_scaffold_250_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4636..5169
DNA (534bp) protein (178aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEL5_CLOBU rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:ENZ31199.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 6
ribosome-associated factor Y
NECEvent2014_4_3_scaffold_250_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5514..8222
DNA (2709bp) protein (903aa)
Protein translocase subunit SecA n=2 Tax=Clostridium butyricum RepID=M8JH02_CLOBU rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
secA; preprotein translocase subunit SecA
NECEvent2014_4_3_scaffold_250_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8536..9579
DNA (1044bp) protein (348aa)
Peptide chain release factor 2 n=2 Tax=Clostridium butyricum RepID=M8JFP5_CLOBU rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia;
prfB; peptide chain release factor 2
NECEvent2014_4_3_scaffold_250_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9639..11021)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF8_CLOBU rbh
Aminopeptidase {ECO:0000313|EMBL:KJZ84410.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminopeptidase
NECEvent2014_4_3_scaffold_250_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..11224)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUU9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31195.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_3_scaffold_250_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11221..11553)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AEL1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96843.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_3_scaffold_250_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11763..12458
DNA (696bp) protein (232aa)
Regulatory protein VanR n=2 Tax=Clostridium butyricum RepID=M8JHZ8_CLOBU rbh
DNA-binding response regulator {ECO:0000313|EMBL:KJZ84455.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gtcR; response regulator GtcR
NECEvent2014_4_3_scaffold_250_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12448..13944
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGG3_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_4_3_scaffold_250_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14065..14970
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUF3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31191.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
CAAX amino terminal protease family
NECEvent2014_4_3_scaffold_250_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15165..17336
DNA (2172bp) protein (724aa)
Tex domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBF2_CLOBU rbh
Transcription accessory protein (S1 RNA-binding domain) {ECO:0000313|EMBL:KJZ93981.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
Tex-like protein
NECEvent2014_4_3_scaffold_250_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17424..18344
DNA (921bp) protein (307aa)
Exported membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7K1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84447.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DMT superfamily permease
Displaying 15 items

View Taxonomy