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NECEvent2014_4_3_scaffold_130

Alias: 174_003_scaffold_130

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_130_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22..375)
DNA (354bp) protein (118aa)
Acetyltransferase domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6D5_CLOPF
Acetyltransferase domain protein {ECO:0000313|EMBL:EDT70607.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D
hypothetical protein
NECEvent2014_4_3_scaffold_130_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

560..1312
DNA (753bp) protein (251aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EDT70604.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EDT70604.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Exodeoxyribonuclease III n=2 Tax=Clostridium perfringens RepID=B1V6D4_CLOPF rbh
exoA; exodeoxyribonuclease III
NECEvent2014_4_3_scaffold_130_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1343..1879)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TRB8_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17319.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_130_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2050..2784
DNA (735bp) protein (245aa)
Haloacid dehalogenase, IB family protein n=8 Tax=Clostridium perfringens RepID=H7CVK0_CLOPF rbh
haloacid dehalogenase
Haloacid dehalogenase, IB family protein {ECO:0000313|EMBL:EDT70610.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_4_3_scaffold_130_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3134..3517
DNA (384bp) protein (128aa)
Mutator mutT protein homolog n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLR7_CLOPF
mutator mutT-like protein
Mutator mutT protein homolog {ECO:0000313|EMBL:EDS79249.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
NECEvent2014_4_3_scaffold_130_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3580..3798
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVJ8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26048.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_3_scaffold_130_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3832..4476)
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CVJ7_CLOPF rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT24422.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_4_3_scaffold_130_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4734..5084
DNA (351bp) protein (117aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CVJ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25415.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_3_scaffold_130_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5119..6393)
DNA (1275bp) protein (425aa)
Sodium:dicarboxylate symporter family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRC4_CLOP1 rbh
sodium:dicarboxylate symporter family protein
Sodium:dicarboxylate symporter family protein {ECO:0000313|EMBL:EIA17313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium p
NECEvent2014_4_3_scaffold_130_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6841..8310
DNA (1470bp) protein (490aa)
Putative lysine-specific permease n=4 Tax=Clostridium perfringens RepID=Q0TRC5_CLOP1 rbh
lysine-specific permease
Putative lysine-specific permease {ECO:0000313|EMBL:EDT25422.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
NECEvent2014_4_3_scaffold_130_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8433..10472
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVJ3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17311.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_130_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10465..11361
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RC25_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT22217.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_3_scaffold_130_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11354..13177
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVJ1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17309.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_130_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13182..14591
DNA (1410bp) protein (470aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CVJ0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17308.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_130_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14595..16055
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVI9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17307.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_130_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16082..17509)
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQJ0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT70150.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_130_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17630..18838)
DNA (1209bp) protein (403aa)
tdcB; threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase, catabolic n=2 Tax=Clostridium perfringens RepID=Q0TRC6_CLOP1 rbh
Threonine dehydratase, catabolic {ECO:0000313|EMBL:EDT22219.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
NECEvent2014_4_3_scaffold_130_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18956..19174
DNA (219bp) protein (73aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVI6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17304.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_130_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19690..21042
DNA (1353bp) protein (451aa)
Probable integrase/recombinase n=2 Tax=Clostridium perfringens RepID=Q8XL79_CLOPE rbh
xerC; site-specific tyrosine recombinase XerC
Probable integrase/recombinase {ECO:0000313|EMBL:BAB80869.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_4_3_scaffold_130_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21133..21525)
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CVI4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_130_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21733..22344
DNA (612bp) protein (204aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=451754 species="Bacteria; Firmicu
LexA repressor n=5 Tax=Clostridium perfringens RepID=LEXA_CLOP1 rbh
NECEvent2014_4_3_scaffold_130_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22524..23429)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQI3_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87072.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_4_3_scaffold_130_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23690..24970)
DNA (1281bp) protein (427aa)
Aluminum resistance protein n=3 Tax=Clostridium perfringens RepID=B1RBK2_CLOPF rbh
Aluminum resistance protein {ECO:0000313|EMBL:EDT22395.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
aluminum resistance protein
NECEvent2014_4_3_scaffold_130_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25075..25317)
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=9 Tax=Clostridium perfringens RepID=HFQ_CLOP1
RNA chaperone Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_3_scaffold_130_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25361..26293)
DNA (933bp) protein (311aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQI0_CLOPF rbh
NECEvent2014_4_3_scaffold_130_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26311..28335)
DNA (2025bp) protein (675aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5J3_CLOPF rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutL; DNA mismatch repair protein
NECEvent2014_4_3_scaffold_130_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28362..31049)
DNA (2688bp) protein (896aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBJ8_CLOPF rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
mutS; DNA mismatch repair protein MutS
NECEvent2014_4_3_scaffold_130_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31310..32017)
DNA (708bp) protein (236aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=1 Tax=Clostridium perfringens F262 RepID=H7CVH6_CLOPF rbh
NECEvent2014_4_3_scaffold_130_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32096..34330)
DNA (2235bp) protein (745aa)
pfl; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase {ECO:0000313|EMBL:EDS81348.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDS81348.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Formate acetyltransferase n=5 Tax=Clostridium perfringens RepID=H7CVH5_CLOPF rbh
Displaying 29 items

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