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NECEvent2014_4_3_scaffold_144

Alias: 174_003_scaffold_144

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_144_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..206
DNA (204bp) protein (68aa)
GGDEF/HD domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFX4_CLOPF
diguanylate cyclase
GGDEF/HD domain protein {ECO:0000313|EMBL:EDT27099.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_3_scaffold_144_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(238..1737)
DNA (1500bp) protein (500aa)
Phytoene dehydrogenase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS41_CLOPF rbh
Phytoene dehydrogenase family protein {ECO:0000313|EMBL:EDS81120.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
phytoene dehydrogenase
NECEvent2014_4_3_scaffold_144_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1742..2434)
DNA (693bp) protein (231aa)
Putative undecaprenyl diphosphate synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS42_CLOPF rbh
Putative undecaprenyl diphosphate synthase {ECO:0000313|EMBL:EDT24656.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
undecaprenyl diphosphate synthase
NECEvent2014_4_3_scaffold_144_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2531..3481
DNA (951bp) protein (317aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XK46_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24700.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_3_scaffold_144_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3783..5798
DNA (2016bp) protein (672aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRF0_CLOPF rbh
Putative membrane protein {ECO:0000313|EMBL:EDT24677.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
hypothetical protein
NECEvent2014_4_3_scaffold_144_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5993..6262
DNA (270bp) protein (90aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CWT5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16836.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_144_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6371..7216
DNA (846bp) protein (282aa)
Putative lipoprotein n=2 Tax=Clostridium perfringens RepID=H7CWT4_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EIA16835.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
lipoprotein
NECEvent2014_4_3_scaffold_144_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7272..7808)
DNA (537bp) protein (179aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Signal peptidase I n=4 Tax=Clostridium perfringens RepID=Q0TQ52_CLOP1 rbh
NECEvent2014_4_3_scaffold_144_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7984..9951
DNA (1968bp) protein (656aa)
Pullulanase n=1 Tax=Clostridium perfringens F262 RepID=H7CWT2_CLOPF rbh
Pullulanase {ECO:0000313|EMBL:EIA16833.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
pulA; pullulanase
NECEvent2014_4_3_scaffold_144_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10172..11161
DNA (990bp) protein (330aa)
Polysaccharide deacetylase family protein n=2 Tax=Clostridium perfringens RepID=B1BGB8_CLOPF rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDS81099.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
polysaccharide deacetylase
NECEvent2014_4_3_scaffold_144_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11371..12432
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XK53_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81256.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_144_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12483..13577)
DNA (1095bp) protein (365aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:EIA16830.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EIA16830.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
prs; phosphoribosylpyrophosphate synthetase (EC:2.7.6.1)
Phosphoribosylpyrophosphate synthetase n=4 Tax=Clostridium perfringens RepID=H7CWS9_CLOPF rbh
NECEvent2014_4_3_scaffold_144_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13989..15977
DNA (1989bp) protein (663aa)
Molybdopterin oxidoreductase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS52_CLOPF rbh
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EDT72513.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
molybdopterin oxidoreductase
NECEvent2014_4_3_scaffold_144_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16067..19468
DNA (3402bp) protein (1134aa)
Putative sporulation protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGB4_CLOPF rbh
Putative sporulation protein {ECO:0000313|EMBL:EDS81132.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
spoVK; stage V sporulation protein K
NECEvent2014_4_3_scaffold_144_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19803..20915
DNA (1113bp) protein (371aa)
Conserved domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSS3_CLOPS rbh
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABG87420.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM
NECEvent2014_4_3_scaffold_144_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21120..21674
DNA (555bp) protein (185aa)
Biotin synthase n=1 Tax=Clostridium perfringens F262 RepID=H7CWS5_CLOPF rbh
Biotin synthase {ECO:0000313|EMBL:EIA16826.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
bioY; biotin synthase
NECEvent2014_4_3_scaffold_144_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21693..22652
DNA (960bp) protein (320aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Biotin synthase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=BIOB_CLOP1 rbh
NECEvent2014_4_3_scaffold_144_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22655..23341
DNA (687bp) protein (229aa)
bioD; dithiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000255|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000255|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000255|HAMAP-Rule:MF_00336}; Short=DTBS {ECO:0000255|H
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=BIOD_CLOP1 rbh
NECEvent2014_4_3_scaffold_144_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23568..24698
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWS2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16823.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_144_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24688..25389
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQ62_CLOP1 rbh
ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB81247.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_144_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25376..26560
DNA (1185bp) protein (395aa)
ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=H7CWS0_CLOPF rbh
ABC transporter
ABC transporter, permease protein {ECO:0000313|EMBL:EIA16821.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_4_3_scaffold_144_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26658..27068)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQ64_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24695.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_3_scaffold_144_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27332..28363
DNA (1032bp) protein (344aa)
Anaerobic sulfite reductase, A subunit n=3 Tax=Clostridium perfringens RepID=B1R536_CLOPF rbh
Anaerobic sulfite reductase, A subunit {ECO:0000313|EMBL:EDT26884.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
asrA; anaerobic sulfite reductase subunit A
NECEvent2014_4_3_scaffold_144_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28364..29155
DNA (792bp) protein (264aa)
Anaerobic sulfite reductase, B subunit n=2 Tax=Clostridium perfringens RepID=B1BGA5_CLOPF rbh
Anaerobic sulfite reductase, B subunit {ECO:0000313|EMBL:EDS81213.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
anaerobic sulfite reductase subunit B
NECEvent2014_4_3_scaffold_144_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29168..30214
DNA (1047bp) protein (349aa)
Anaerobic sulfite reductase subunit C n=3 Tax=Clostridium perfringens RepID=H7CWR6_CLOPF rbh
Anaerobic sulfite reductase, C subunit {ECO:0000313|EMBL:EDT26865.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
anaerobic sulfite reductase subunit C
NECEvent2014_4_3_scaffold_144_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30726..31352
DNA (627bp) protein (209aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XK68_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14466.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Displaying 26 items

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