ggKbase home page

NECEvent2014_4_3_scaffold_225

Alias: 174_003_scaffold_225

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_225_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(183..2027)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN21_CLOPE rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80223.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
von Willebrand factor A
NECEvent2014_4_3_scaffold_225_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2044..2670)
DNA (627bp) protein (209aa)
Alternate signal-mediated exported protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTV3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT28024.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_3_scaffold_225_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2673..3404)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R3T1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT25107.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_3_scaffold_225_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3452..4087)
DNA (636bp) protein (212aa)
Alternate signal-mediated exported protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTV5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT72113.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_225_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4141..4665)
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000313|EMBL:EDT24946.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT24946.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
Signal peptidase I n=2 Tax=Clostridium perfringens RepID=B1R3T3_CLOPF rbh
signal peptidase type I
NECEvent2014_4_3_scaffold_225_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4904..5653
DNA (750bp) protein (250aa)
Sortase B n=3 Tax=Clostridium perfringens RepID=Q0TTU4_CLOP1 rbh
sortase
Sortase B {ECO:0000313|EMBL:EDT25141.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
NECEvent2014_4_3_scaffold_225_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5799..8003)
DNA (2205bp) protein (735aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Clostridium perfringens F262 RepID=H7CSU8_CLOPF rbh
Alpha-galactosidase {ECO:0000313|EMBL:EIA18242.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_225_trna_1
unknown

Not on your lists

comp(8297..8369)
DNA (73bp)
transferRNA
NECEvent2014_4_3_scaffold_225_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8513..9205)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18239.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein rbh
NECEvent2014_4_3_scaffold_225_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9531..10475)
DNA (945bp) protein (315aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451756 s
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF rbh
galF; UTP-glucose-1-phosphate uridylyltransferase
NECEvent2014_4_3_scaffold_225_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10757..11773)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT16704.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT16704.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V210_CLOPF rbh
galE; UDP-glucose 4-epimerase
NECEvent2014_4_3_scaffold_225_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11851..14094)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGV4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80951.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_225_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14518..15165)
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF rbh
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_4_3_scaffold_225_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15535..16455)
DNA (921bp) protein (307aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883064 s
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CSU0_CLOPF rbh
NECEvent2014_4_3_scaffold_225_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16646..18187)
DNA (1542bp) protein (514aa)
Flippase n=1 Tax=Clostridium perfringens F262 RepID=H7CST9_CLOPF rbh
Flippase {ECO:0000313|EMBL:EIA18233.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
putative membrane protein
NECEvent2014_4_3_scaffold_225_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18200..19207)
DNA (1008bp) protein (336aa)
Family 2 glycosyl transferase n=1 Tax=Clostridium perfringens F262 RepID=H7CST8_CLOPF rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIA18232.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
glycosyltransferase
NECEvent2014_4_3_scaffold_225_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19228..20226)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CST7_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18231.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 17 items

View Taxonomy