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NECEvent2014_4_3_scaffold_249

Alias: 174_003_scaffold_249

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_249_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1170)
DNA (1170bp) protein (390aa)
Pyrimidine nucleoside transporter n=3 Tax=Clostridium perfringens RepID=H7CVV9_CLOPF rbh
Pyrimidine nucleoside transporter {ECO:0000313|EMBL:EIA17184.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
pyrimidine nucleoside transporter
NECEvent2014_4_3_scaffold_249_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1557..3455)
DNA (1899bp) protein (633aa)
Putative integral inner membrane protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVW0_CLOPF rbh
Putative integral inner membrane protein {ECO:0000313|EMBL:EIA17185.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
hypothetical protein
NECEvent2014_4_3_scaffold_249_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3501..3926)
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STF2_CLOPS
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABG86925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_3_scaffold_249_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4209..5306)
DNA (1098bp) protein (366aa)
S41 family peptidase n=1 Tax=Clostridium perfringens F262 RepID=H7CVW2_CLOPF rbh
S41 family peptidase {ECO:0000313|EMBL:EIA17187.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
S41 family peptidase
NECEvent2014_4_3_scaffold_249_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5641..6093
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQW4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS79418.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_249_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6192..8114)
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQW5_CLOPF rbh
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EIA17189.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
NECEvent2014_4_3_scaffold_249_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8130..8891)
DNA (762bp) protein (254aa)
Alpha/beta fold family hydrolase n=2 Tax=Clostridium perfringens RepID=H7CVW5_CLOPF rbh
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EIA17190.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
hypothetical protein
NECEvent2014_4_3_scaffold_249_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8918..10282)
DNA (1365bp) protein (455aa)
Glucuronide permease n=3 Tax=Clostridium perfringens RepID=B1BWZ1_CLOPF rbh
Glucuronide permease {ECO:0000313|EMBL:EDT13782.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
sugar (Glycoside-Pentoside-Hexuronide) transporter
NECEvent2014_4_3_scaffold_249_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10499..11332
DNA (834bp) protein (278aa)
AraC-type sugar metabolism regulator n=1 Tax=Clostridium perfringens F262 RepID=H7CVW7_CLOPF rbh
AraC-type sugar metabolism regulator {ECO:0000313|EMBL:EIA17192.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
AraC family transcription regulator
NECEvent2014_4_3_scaffold_249_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11654..12961)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CVW8_CLOPF rbh
C4-dicarboxylate transport system {ECO:0000313|EMBL:EDT72961.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D
tripartite ATP-independent dicarboxylate transporter large subunit 1
NECEvent2014_4_3_scaffold_249_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12987..13499)
DNA (513bp) protein (171aa)
C4-dicarboxylate transport system permease small protein n=2 Tax=Clostridium perfringens RepID=H7CVW9_CLOPF rbh
C4-dicarboxylate transport system permease small protein {ECO:0000313|EMBL:EIA17194.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
NECEvent2014_4_3_scaffold_249_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13522..14529)
DNA (1008bp) protein (336aa)
C4-dicarboxylate transport system substrate-binding protein n=2 Tax=Clostridium perfringens RepID=B1REH7_CLOPF rbh
C4-dicarboxylate transport system substrate-binding protein {ECO:0000313|EMBL:EDT27611.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
TRAP dicarboxylate transporter subunit DctP
NECEvent2014_4_3_scaffold_249_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15853..16431)
DNA (579bp) protein (193aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO
Xanthine phosphoribosyltransferase 2 n=11 Tax=Clostridium perfringens RepID=XPT2_CLOP1 rbh
NECEvent2014_4_3_scaffold_249_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16604..17593
DNA (990bp) protein (330aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQZ8_CLOP1 rbh
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS79426.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
NECEvent2014_4_3_scaffold_249_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17942..18550)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQX4_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT13780.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987
lipoprotein
Displaying 15 items

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