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NECEvent2014_4_3_scaffold_266

Alias: 174_003_scaffold_266

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_266_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..61)
DNA (60bp) protein (20aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSW9_CLOPF
Sensor histidine kinase; TaxID=451757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens NCTC 8239.;"
sensor histidine kinase
NECEvent2014_4_3_scaffold_266_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(51..1937)
DNA (1887bp) protein (629aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
sensor histidine kinase
NECEvent2014_4_3_scaffold_266_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2058..2993)
DNA (936bp) protein (312aa)
Tetratricopeptide repeat protein n=7 Tax=Clostridium perfringens RepID=Q0TNX3_CLOP1 rbh
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT16236.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_4_3_scaffold_266_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3114..4034)
DNA (921bp) protein (307aa)
Hydrolase, alpha/beta fold family n=2 Tax=Clostridium perfringens RepID=Q0TNX2_CLOP1 rbh
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EDT72800.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D
NECEvent2014_4_3_scaffold_266_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4157..4753)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BIM4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS80321.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_266_trna_1
unknown

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comp(4897..4979)
DNA (83bp)
transferRNA
NECEvent2014_4_3_scaffold_266_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5039..6181)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIX2_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81697.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_266_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6206..6751)
DNA (546bp) protein (182aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY18_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16395.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_266_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6761..7360)
DNA (600bp) protein (200aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=451755 species="Bacteria; Fi
Dephospho-CoA kinase n=8 Tax=Clostridium perfringens RepID=COAE_CLOPE rbh
NECEvent2014_4_3_scaffold_266_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7377..9977)
DNA (2601bp) protein (867aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
DNA polymerase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNW7_CLOP1 rbh
NECEvent2014_4_3_scaffold_266_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10334..11251)
DNA (918bp) protein (306aa)
glutaminase (EC:3.5.1.2)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=451755 species="Bacteria; Firmicutes;
Glutaminase 2 n=10 Tax=Clostridium perfringens RepID=GLSA2_CLOPE rbh
NECEvent2014_4_3_scaffold_266_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11490..12005
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPT2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16346.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_266_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12055..13323
DNA (1269bp) protein (423aa)
aminopeptidase (EC:3.4.11.-)
Aminopeptidase n=7 Tax=Clostridium perfringens RepID=H7CY23_CLOPF rbh
Aminopeptidase {ECO:0000313|EMBL:EIA16400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_266_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13537..14586)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CY24_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16401.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_266_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14603..15613)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CY25_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16402.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_266_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16524..16781)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XIW3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81706.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying 16 items

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