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NECEvent2014_4_3_scaffold_303

Alias: 174_003_scaffold_303

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_303_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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169..768
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XNQ0_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_303_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(804..1679)
DNA (876bp) protein (292aa)
Putative aldose 1-epimerase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNG5_CLOPF rbh
aldose 1-epimerase
Putative aldose 1-epimerase {ECO:0000313|EMBL:EDT23665.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_4_3_scaffold_303_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1790..2812)
DNA (1023bp) protein (341aa)
Transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CS81_CLOPF rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EIA18403.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_303_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2988..3839
DNA (852bp) protein (284aa)
YihY family protein n=5 Tax=Clostridium perfringens RepID=Q0TUE9_CLOP1 rbh
hypothetical protein
YihY family protein {ECO:0000313|EMBL:EDT13885.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.
NECEvent2014_4_3_scaffold_303_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3900..4886)
DNA (987bp) protein (329aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ABG86328.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABG86328.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
UDP-glucose 4-epimerase n=5 Tax=Clostridium perfringens RepID=H7CS83_CLOPF rbh
NECEvent2014_4_3_scaffold_303_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5040..5384
DNA (345bp) protein (115aa)
Single-stranded DNA-binding protein n=11 Tax=Clostridium perfringens RepID=H7CS84_CLOPF
single-strand binding protein family
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=451756 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_4_3_scaffold_303_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5459..6709)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CU15_CLOPF rbh
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDT70432.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_4_3_scaffold_303_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7162..10569)
DNA (3408bp) protein (1136aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNF9_CLOPF rbh
endo-beta-N-acetylglucosaminidase
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDT13868.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_4_3_scaffold_303_9
unknown

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10807..10965
DNA (159bp) protein (53aa)

This feature has no annotations

NECEvent2014_4_3_scaffold_303_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10940..11245
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS87_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18409.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_303_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11294..11695
DNA (402bp) protein (134aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=7 Tax=Clostridium perfringens RepID=H7CS88_CLOPF
NECEvent2014_4_3_scaffold_303_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11682..13181
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CU11_CLOPF rbh
Carbohydrate kinase family protein {ECO:0000313|EMBL:EDT23704.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
carbohydrate kinase
NECEvent2014_4_3_scaffold_303_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13242..13835
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CS89_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 13 items

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