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NECEvent2014_4_3_scaffold_285_7

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 5435..5932

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=8 Tax=Clostridium perfringens RepID=RIMM_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 329
  • Evalue 1.50e-87
  • rbh
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 329
  • Evalue 4.30e-88
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 329
  • Evalue 2.10e-87

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
ATGGAAGATTTATTAGTAGTTGGTCAAATAATAAACACTCATGGTTTAAGAGGTGAAATGAAAGTTATGCCTTTAACTGAAGATATGAGAAGATTTGACTATTTAGAATATGTTATCTTAAAAGGGAAAAAGGTTAAAGTAGAGGGCGTAAAATACTTTAAGGATAAAGTTATACTTAAAGTAGAAGGAATAAATTCAATAGAGGAAGCTGAAAAACTAAAAAGAACTTATTTAGAAATAGAACGTGAAGATGCTATAGAGCTTGAAGAAGATGAATATTTCATAGTTGATTTAGTTGGATGCACTGTTGTTGATACAGAGGGATTTGAGTATGGAAAAATCAAAGATGTAATCCAAACTCCAAGTAATGATGTTTATTGGGTTCAAGGAAAGAAGGAAGTATTAGTTCCAGTATTAAAAGATATAGTTTTAGATATTAATATGGATGAAAAATTAATTACTATAAGACCTTCTGGAGAGTGGCAATATGAAGATTAA
PROTEIN sequence
Length: 166
MEDLLVVGQIINTHGLRGEMKVMPLTEDMRRFDYLEYVILKGKKVKVEGVKYFKDKVILKVEGINSIEEAEKLKRTYLEIEREDAIELEEDEYFIVDLVGCTVVDTEGFEYGKIKDVIQTPSNDVYWVQGKKEVLVPVLKDIVLDINMDEKLITIRPSGEWQYED*