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NECEvent2014_4_3_scaffold_285

Alias: 174_003_scaffold_285

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_285_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..2017
DNA (2016bp) protein (672aa)
Chromosome partition protein Smc n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQ84_CLOPF rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
smc; chromosome segregation protein SMC
NECEvent2014_4_3_scaffold_285_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2031..2945
DNA (915bp) protein (305aa)
Signal recognition particle receptor FtsY n=3 Tax=Clostridium perfringens RepID=H7CXB1_CLOPF rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiale
ftsY; signal recognition particle-docking protein FtsY
NECEvent2014_4_3_scaffold_285_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3121..3459
DNA (339bp) protein (113aa)
UPF0122 protein CPF_1968 n=3 Tax=Clostridium perfringens RepID=Y1968_CLOP1
DNA-binding protein
UPF0122 protein AC1_2139 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_4_3_scaffold_285_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3471..4829
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=8 Tax=Clostridium perfringens RepID=H7CXA9_CLOPF rbh
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
NECEvent2014_4_3_scaffold_285_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4863..5108
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=11 Tax=Clostridium perfringens RepID=RS16_CLOP1
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_3_scaffold_285_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5152..5379
DNA (228bp) protein (76aa)
UPF0109 protein HA1_10371 n=3 Tax=Clostridium perfringens RepID=H7CXA7_CLOPF
UPF0109 protein HA1_10371 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
hypothetical protein
NECEvent2014_4_3_scaffold_285_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5435..5932
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=8 Tax=Clostridium perfringens RepID=RIMM_CLOP1 rbh
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_4_3_scaffold_285_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5922..6632
DNA (711bp) protein (237aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Clostridium perfringens RepID=B1RQ78_CLOPF rbh
NECEvent2014_4_3_scaffold_285_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6753..7100
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=8 Tax=Clostridium perfringens RepID=RL19_CLOP1
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_4_3_scaffold_285_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7248..8093
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=4 Tax=Clostridium perfringens RepID=H7CXA3_CLOPF rbh
rbgA; ribosomal biogenesis GTPase rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_4_3_scaffold_285_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8109..8927
DNA (819bp) protein (273aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Clostridium perfringens RepID=H7CXA2_CLOPF rbh
NECEvent2014_4_3_scaffold_285_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8928..9296)
DNA (369bp) protein (123aa)
UPF0102 protein HA1_10341 n=1 Tax=Clostridium perfringens F262 RepID=H7CXA1_CLOPF
UPF0102 protein HA1_10341 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
hypothetical protein
NECEvent2014_4_3_scaffold_285_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9427..10950
DNA (1524bp) protein (508aa)
Mg chelatase-like protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXA0_CLOPF rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EIA16555.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Mg chelatase-like protein
NECEvent2014_4_3_scaffold_285_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10951..12036
DNA (1086bp) protein (362aa)
DNA protecting protein DprA n=1 Tax=Clostridium perfringens F262 RepID=H7CX99_CLOPF rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EIA16554.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
dprA; DNA protecting protein DprA
NECEvent2014_4_3_scaffold_285_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12030..14180
DNA (2151bp) protein (717aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=883064 species="Bacteria; Firmicutes
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium perfringens F262 RepID=H7CX98_CLOPF rbh
NECEvent2014_4_3_scaffold_285_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14322..15098
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=11 Tax=Clostridium perfringens RepID=CODY_CLOP1 rbh
codY; transcriptional repressor CodY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Displaying 16 items

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