ggKbase home page

NECEvent2014_4_3_scaffold_352_5

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(3371..4174)

Top 3 Functional Annotations

Value Algorithm Source
PTS system mannose-specific transporter subunit IIC n=7 Tax=Clostridium perfringens RepID=H7CTS1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 267.0
  • Bit_score: 505
  • Evalue 3.30e-140
  • rbh
PTS system mannose/fructose/sorbose family transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 267.0
  • Bit_score: 503
  • Evalue 2.70e-140
PTS system {ECO:0000313|EMBL:BAB80528.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 267.0
  • Bit_score: 503
  • Evalue 1.30e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 804
GTGGATTTAAATATAATTCAAATAATATTAGTTATTATTATTGCATTCTTAGCTGGTATGGGAGGGATCCTAGACGAATTCCAATTTCATCAACCATTAGTTGCTTGTACTTTAATAGGTTTAGTTACAGGTAATTTAATACCATGTTTAATCCTAGGCGGTAGTCTTCAAATGATCGCTTTAGGTTGGGCAAACATAGGTGCTGCCGTAGCACCAGACGCAGCATTAGCATCCGTTGCAGCTGCAATTATCTTAGTTCTTAGTGGAGAAGGGCAAGCGGGAATATCTTCAGCTATCGCTATAGCAATTCCACTAGCTGTTGCTGGATTATTATTAACAATTATTTGTCGTACAATAGCTACAGCATTTGTACACCTTATGGATGCTGCTGCTAAAGAAGGTAATATAAGAAAAGTTGAAATGTGGCATTTCATTGCTATTCTTATGCAAGGTGTACGTATAGCATTACCAGCTGCATTAATTTTATTAATAGGTGCTGGTCCAATAAGCGCATTACTTGCTTCTATGCCTGCTTGGTTAACAGATGGTTTAGCAGTAGGTGGTGGAATGGTAGTAGCTGTTGGTTACGCAATGGTAATTAACATGATGGCAACAAAAGAAGTATGGCCATTCTTTGCAATCGGTTTTGTATTAGCAACTATTCCTCAACTTACACTTATAGGATTAGGTGCAATTGGTGTAGCTTTAGCTCTTATTTACTTAGCACTTAGCAAAAAAGGTGGCTCAGGTAATGGTGGATCAAACATAGGAGATCCAGTAGGCGATATTATCGATAGATACTAA
PROTEIN sequence
Length: 268
VDLNIIQIILVIIIAFLAGMGGILDEFQFHQPLVACTLIGLVTGNLIPCLILGGSLQMIALGWANIGAAVAPDAALASVAAAIILVLSGEGQAGISSAIAIAIPLAVAGLLLTIICRTIATAFVHLMDAAAKEGNIRKVEMWHFIAILMQGVRIALPAALILLIGAGPISALLASMPAWLTDGLAVGGGMVVAVGYAMVINMMATKEVWPFFAIGFVLATIPQLTLIGLGAIGVALALIYLALSKKGGSGNGGSNIGDPVGDIIDRY*