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NECEvent2014_4_3_scaffold_352

Alias: 174_003_scaffold_352

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_352_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18..935)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNZ5_CLOPF rbh
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT13769.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
polysaccharide deacetylase
NECEvent2014_4_3_scaffold_352_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1161..1508)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNZ4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71625.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_4_3_scaffold_352_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1893..2267)
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTS3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71603.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_4_3_scaffold_352_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2440..3351)
DNA (912bp) protein (304aa)
PTS system, mannose/fructose/sorbose family, IID component n=6 Tax=Clostridium perfringens RepID=B1BFN1_CLOPF rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EDT28368.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_4_3_scaffold_352_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3371..4174)
DNA (804bp) protein (268aa)
PTS system mannose-specific transporter subunit IIC n=7 Tax=Clostridium perfringens RepID=H7CTS1_CLOPF rbh
PTS system mannose/fructose/sorbose family transporter subunit IIC
PTS system {ECO:0000313|EMBL:BAB80528.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_4_3_scaffold_352_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4225..5205)
DNA (981bp) protein (327aa)
PTS system n=6 Tax=Clostridium perfringens RepID=Q8XM69_CLOPE rbh
PTS system transporter
PTS system {ECO:0000313|EMBL:BAB80527.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_4_3_scaffold_352_7
unknown

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5386..5640
DNA (255bp) protein (85aa)

This feature has no annotations

NECEvent2014_4_3_scaffold_352_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5532..6359)
DNA (828bp) protein (276aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCE9_CLOPF rbh
HAD hydrolase, IIB family {ECO:0000313|EMBL:EDT28366.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str.
hypothetical protein
NECEvent2014_4_3_scaffold_352_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6506..7414)
DNA (909bp) protein (303aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYD3_CLOPF rbh
NECEvent2014_4_3_scaffold_352_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7615..10998)
DNA (3384bp) protein (1128aa)
Glycosyl hydrolase, family 85 n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BFN6_CLOPF rbh
Glycosyl hydrolase, family 85 {ECO:0000313|EMBL:EDS81429.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str
glycosyl hydrolase
Displaying 10 items

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