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NECEvent2014_4_3_scaffold_246_13

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(16047..16565)

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV pilin n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF07_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 337
  • Evalue 7.60e-90
  • rbh
Putative type IV pilin {ECO:0000313|EMBL:EDT27398.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F49 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 336
  • Evalue 3.10e-89
type IV pilin similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 172.0
  • Bit_score: 305
  • Evalue 6.90e-81

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 519
GTGAGTATTAGAAGTGAGAGAAGGAAAAAAGGCTTTACTTTAATAGAACTTATTATAGTTGTAGCAATTATAGGAATATTAGCAGCTATAGCTATACCAAACTTTTTAGCTATTCAAAGAAAAGCTAGAATTCAAGCTGATATTGCAACAGGAAAAACAATATATGATGCTACTATAGAGTTGATTGCTGAAGGAAAAGAAGGGTTTAATATGCCTGAGAAAACAACTATAAAAGATAAGGATGGAAAGTTGATTACTTATTATGGATATGGTATTGACTTATCTAGTTCGAGTGATGAAAGAGCAAAAGAATTAAGAAAGTATATATTAAATAGCACTAATTTAAAACCTAAGGCATTTAAAGATTGTCATTTTTATGTAAGTGTAACATTTAATTATTCAAGTGATAATTCAGAAAATGGATATGATTTAAATAAACCAATAGTTAGAGTAGATATTATAGGTGCAGATAATAATTCTAGAGGTGAAGTGTATCCTGATAACAAACTTTTAAATTAA
PROTEIN sequence
Length: 173
VSIRSERRKKGFTLIELIIVVAIIGILAAIAIPNFLAIQRKARIQADIATGKTIYDATIELIAEGKEGFNMPEKTTIKDKDGKLITYYGYGIDLSSSSDERAKELRKYILNSTNLKPKAFKDCHFYVSVTFNYSSDNSENGYDLNKPIVRVDIIGADNNSRGEVYPDNKLLN*