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NECEvent2014_4_3_scaffold_246

Alias: 174_003_scaffold_246

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_246_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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184..1476
DNA (1293bp) protein (431aa)
Nitrate extrusion protein n=4 Tax=Clostridium perfringens RepID=H7CYX7_CLOPF rbh
narK; nitrate extrusion protein rbh
Probable nitrate extrusion protein {ECO:0000313|EMBL:BAB81980.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_3_scaffold_246_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..3370)
DNA (1530bp) protein (510aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUU9_CLOPF rbh
NECEvent2014_4_3_scaffold_246_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3476..4930)
DNA (1455bp) protein (485aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CYX9_CLOPF rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
NECEvent2014_4_3_scaffold_246_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5641..8256)
DNA (2616bp) protein (872aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYY0_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16046.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_246_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8280..8840)
DNA (561bp) protein (187aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=3 Tax=Clostridium perfringens RepID=H7CYY1_CLOPF rbh
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIA16047.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
prepilin-type N-terminal cleavage/methylation domain-containing protein
NECEvent2014_4_3_scaffold_246_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8866..10974)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYY2_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16048.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_246_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10976..11980)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYY3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16049.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_246_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12001..13218)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYY4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16050.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_3_scaffold_246_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13208..13774)
DNA (567bp) protein (189aa)
Type IV pilus biogenesis protein PilN n=2 Tax=Clostridium perfringens RepID=B1BMW9_CLOPF rbh
Type IV pilus biogenesis protein PilN {ECO:0000313|EMBL:EDT15950.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
hypothetical protein
NECEvent2014_4_3_scaffold_246_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13789..14943)
DNA (1155bp) protein (385aa)
Type IV pilus assembly protein PilM n=2 Tax=Clostridium perfringens RepID=B1BMW8_CLOPF rbh
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EDT16032.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
type IV pilus assembly protein PilM
NECEvent2014_4_3_scaffold_246_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15032..15505)
DNA (474bp) protein (158aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF05_CLOPF rbh
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27430.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
hypothetical protein
NECEvent2014_4_3_scaffold_246_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15521..15994)
DNA (474bp) protein (158aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF06_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27426.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
type IV pilin
NECEvent2014_4_3_scaffold_246_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16047..16565)
DNA (519bp) protein (173aa)
Putative type IV pilin n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF07_CLOPF rbh
Putative type IV pilin {ECO:0000313|EMBL:EDT27398.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F49
type IV pilin
NECEvent2014_4_3_scaffold_246_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16591..17796)
DNA (1206bp) protein (402aa)
Bacterial type II secretion system protein F n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPE3_CLOPF rbh
Bacterial type II secretion system protein F {ECO:0000313|EMBL:EDS78835.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
type II secretion system protein F
NECEvent2014_4_3_scaffold_246_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17823..18632)
DNA (810bp) protein (270aa)
Secretion system protein E n=5 Tax=Clostridium perfringens RepID=H7CYZ1_CLOPF
secretion system protein E
Secretion system protein E {ECO:0000313|EMBL:EDT15922.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
Displaying 15 items

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