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NECEvent2014_4_3_scaffold_257_7

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(6211..6678)

Top 3 Functional Annotations

Value Algorithm Source
def; polypeptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 308
  • Evalue 9.60e-82
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 308
  • Evalue 4.80e-81
Peptide deformylase 2 n=5 Tax=Clostridium perfringens RepID=DEF2_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 308
  • Evalue 3.40e-81
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 468
ATGGCTGTTAAGAAAATAGTTCAAATAGGACACGAAGCTTTAAAAAAGGTTTCAGAACCTGTTAAAGATGTTAATGAAGTTAAAGGATTAATACAAGATTTAAAAGATACATTAGCAACTGTAGAAGGAATAGGATTAGCTGCACCTCAAATAGCAGTTAATAAAAGAGTTGTTTATATAAATTTTGGAGATGGTGAGAATGAATATGTTCTTATAAATCCAGAGGTAACAGGAGTTTCAAAGGAAACTTATGAAGATTATGAAGGTTGTTTAAGCTATGTAATGCATGAGGGATTAGTTGAAAGACCAAGAGCAGTAAGAATACAAGCTTTAAATGAAAAGGGCGAATTAAAAGTTTATGAAGCTCAAGATCTTTTAGCAAGATGTTTCTTACATGAGATAGATCACTTAGAAGGTATTATGTACGTTGATAGAGCTAAAGAAATGTACGAATTAGTTGAAAAATAA
PROTEIN sequence
Length: 156
MAVKKIVQIGHEALKKVSEPVKDVNEVKGLIQDLKDTLATVEGIGLAAPQIAVNKRVVYINFGDGENEYVLINPEVTGVSKETYEDYEGCLSYVMHEGLVERPRAVRIQALNEKGELKVYEAQDLLARCFLHEIDHLEGIMYVDRAKEMYELVEK*