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NECEvent2014_4_3_scaffold_257

Alias: 174_003_scaffold_257

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_257_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(133..1134)
DNA (1002bp) protein (334aa)
LacI family transcription regulator n=1 Tax=Clostridium perfringens F262 RepID=H7CX07_CLOPF rbh
LacI family transcription regulator {ECO:0000313|EMBL:EIA16908.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
LacI family transcription regulator
NECEvent2014_4_3_scaffold_257_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1273..2178)
DNA (906bp) protein (302aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium perfringens F262 RepID=H7CX08_CLOPF rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EIA16909.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
rbsB; ABC-type sugar transport system, periplasmic component
NECEvent2014_4_3_scaffold_257_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2200..3135)
DNA (936bp) protein (312aa)
Ribose ABC transporter, permease protein n=7 Tax=Clostridium perfringens RepID=H7CX09_CLOPF rbh
rbsC; ribose ABC transporter permease
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:EIA16910.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_4_3_scaffold_257_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3149..4654)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Ribose import ATP-binding protein RbsA n=6 Tax=Clostridium perfringens RepID=RBSA_CLOP1 rbh
rbsA; ribose ABC transporter ATP-binding protein
NECEvent2014_4_3_scaffold_257_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4740..5135)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=883064 species="Bacteria; Firm
D-ribose pyranase n=2 Tax=Clostridium perfringens RepID=H7CX11_CLOPF
rbsD; D-ribose pyranase
NECEvent2014_4_3_scaffold_257_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5138..6070)
DNA (933bp) protein (311aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:EDT24735.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EDT24735.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Ribokinase n=2 Tax=Clostridium perfringens RepID=Q0TPX3_CLOP1 rbh
NECEvent2014_4_3_scaffold_257_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6211..6678)
DNA (468bp) protein (156aa)
def; polypeptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase 2 n=5 Tax=Clostridium perfringens RepID=DEF2_CLOPE rbh
NECEvent2014_4_3_scaffold_257_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6834..7793)
DNA (960bp) protein (320aa)
glycoside hydrolase family protein (EC:2.7.8.-)
Glycosyl transferase, group 4 family protein {ECO:0000313|EMBL:EDT14147.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT14147.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Glycosyl transferase, group 4 family protein n=5 Tax=Clostridium perfringens RepID=H7CX14_CLOPF rbh
NECEvent2014_4_3_scaffold_257_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7939..8505)
DNA (567bp) protein (189aa)
Probable transcriptional regulator n=8 Tax=Clostridium perfringens RepID=Q8XJW8_CLOPE rbh
transcriptional regulatory protein
Putative transcriptional regulatory protein {ECO:0000313|EMBL:EDT14145.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_3_scaffold_257_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8721..9365)
DNA (645bp) protein (215aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=10 Tax=Clostridium perfringens RepID=H7CX16_CLOPF rbh
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
NECEvent2014_4_3_scaffold_257_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9368..10750)
DNA (1383bp) protein (461aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=10 Tax=Clostridium perfringens RepID=VATB_CLOP1 rbh
V-type ATP synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000255|HAMAP-Rule:MF_00310}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_4_3_scaffold_257_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10743..12518)
DNA (1776bp) protein (592aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=451756 species="Bacteria;
V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=8 Tax=Clostridium perfringens RepID=VATA_CLOP1 rbh
NECEvent2014_4_3_scaffold_257_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12535..12852)
DNA (318bp) protein (106aa)
V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=11 Tax=Clostridium perfringens RepID=VATF_CLOPE
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
NECEvent2014_4_3_scaffold_257_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..13846)
DNA (1008bp) protein (336aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type sodium ATP synthase subunit C n=4 Tax=Clostridium perfringens RepID=Q8XJW3_CLOPE rbh
V-type ATPase, C subunit {ECO:0000313|EMBL:EDT14161.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
NECEvent2014_4_3_scaffold_257_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13859..14455)
DNA (597bp) protein (199aa)
V-type ATP synthase subunit E n=9 Tax=Clostridium perfringens RepID=VATE_CLOP1 rbh
V-type ATPase, E subunit
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_4_3_scaffold_257_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14486..14980)
DNA (495bp) protein (165aa)
V-type ATP synthase subunit K (EC:3.6.3.14)
V-type ATPase, K subunit n=6 Tax=Clostridium perfringens RepID=Q0TPW3_CLOP1 rbh
V-type ATPase, K subunit {ECO:0000313|EMBL:EDT14155.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
NECEvent2014_4_3_scaffold_257_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15035..16984)
DNA (1950bp) protein (650aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATPase, I subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4T5_CLOPF rbh
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B s
NECEvent2014_4_3_scaffold_257_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16971..17297)
DNA (327bp) protein (109aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CX24_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16925.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 18 items

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