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NECEvent2014_4_4_scaffold_465

Alias: 174_004_scaffold_465

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_465_1
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..399
DNA (399bp) protein (133aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E0NMZ3_9FIRM
FIG00628965: hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGS30606.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
NECEvent2014_4_4_scaffold_465_2
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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776..2695
DNA (1920bp) protein (640aa)
tetracycline resistance protein tetM n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002ED6A89 rbh
TetM {ECO:0000313|EMBL:ABN11268.1}; Tetracycline resistance determinant {ECO:0000313|EMBL:ACS92743.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococc
Tetracycline resistance protein tetM
NECEvent2014_4_4_scaffold_465_3
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3041..3394)
DNA (354bp) protein (118aa)
Uncharacterized protein n=406 Tax=Bacteria RepID=L7VTH0_LISMN
Tn916, transcriptional regulator
Tn916, transcriptional regulator, putative {ECO:0000313|EMBL:AAM99807.1}; TaxID=208435 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus
NECEvent2014_4_4_scaffold_465_4
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3754..3942
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Bacilli RepID=S7XJ81_STREE
Uncharacterized protein {ECO:0000313|EMBL:CDO19410.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
NECEvent2014_4_4_scaffold_465_5
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3899..4321
DNA (423bp) protein (141aa)
Uncharacterized protein n=15 Tax=Bacilli RepID=A4VUU6_STRSY
hypothetical protein
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFU07469.1}; TaxID=749510 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus
NECEvent2014_4_4_scaffold_465_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4318..4548
DNA (231bp) protein (77aa)
Uncharacterized protein n=335 Tax=Bacteria RepID=L7VT00_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERT28239.1}; TaxID=1391468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4539.;"
NECEvent2014_4_4_scaffold_465_7
Streptococcus infantis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5009..5212
DNA (204bp) protein (68aa)
Excisionase from transposon Tn916 n=413 Tax=Bacteria RepID=XIS_STRA5
Tn916 ORF1 excisionase
Excisionase {ECO:0000313|EMBL:EGL85906.1}; TaxID=1005705 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantis SK1076.;"
NECEvent2014_4_4_scaffold_465_8
Gemella morbillorum, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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5294..6511
DNA (1218bp) protein (406aa)
Transposase from transposon Tn1545 n=380 Tax=Bacteria RepID=TNR5_STRA5 rbh
integrase
Phage integrase {ECO:0000313|EMBL:EFV35759.1}; TaxID=562982 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella morbillorum M424.;"
NECEvent2014_4_4_scaffold_465_9
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6873..7430)
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=D3MQN4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY47601.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" sourc
NECEvent2014_4_4_scaffold_465_10
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7909..8127)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=2 Tax=Peptostreptococcus RepID=D3MQN5_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCY47604.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" sour
putative transcription regulator protein
NECEvent2014_4_4_scaffold_465_11
unknown

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8454..8564
DNA (111bp) protein (37aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_465_12
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9030..9188
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Peptostreptococcus anaerobius RepID=UPI0003636854
Displaying 12 items

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