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NECEvent2014_4_4_scaffold_806

Alias: 174_004_scaffold_806

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_806_1
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..477
DNA (477bp) protein (159aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8P0_ATOPD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACV50478.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium pa
NECEvent2014_4_4_scaffold_806_2
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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971..1291
DNA (321bp) protein (107aa)
Transposase orfA IS3/IS911 family n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BSE8_9GAMM
transposase IS3/IS911 family protein Tax=RBG_16_Acidobacteria_64_8_curated
hypothetical protein
NECEvent2014_4_4_scaffold_806_3
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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1291..2169
DNA (879bp) protein (293aa)
Transposase orfB IS3/IS911 family n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CEW8_9GAMM rbh
Integrase catalytic domain-containing protein Tax=RBG_13_Actinobacteria_55_18_curated
integrase catalytic region
NECEvent2014_4_4_scaffold_806_4
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2173..2970)
DNA (798bp) protein (266aa)
Transposase n=1 Tax=Rhodococcus qingshengii BKS 20-40 RepID=M2X4U1_9NOCA
Transposase {ECO:0000313|EMBL:KID29593.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
putative Transposase for IS6110 (fragment)
NECEvent2014_4_4_scaffold_806_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2985..3338)
DNA (354bp) protein (118aa)
Transposase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EUW2_9NOCA
transposase
Transposase {ECO:0000313|EMBL:AFU00894.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
NECEvent2014_4_4_scaffold_806_6
Gordonibacter pamelaeae, Gordonibacter, Coriobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3815..4099
DNA (285bp) protein (95aa)
Helix-turn-helix n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E8B0_9ACTN
Helix-turn-helix.
NECEvent2014_4_4_scaffold_806_7
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4105..4608
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WH77_EGGLE
OppA; dipeptide/oligopeptide/nickel ABC transporter periplasmic protein
ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component {ECO:0000313|EMBL:BAK43719.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthell
NECEvent2014_4_4_scaffold_806_8
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4647..5225
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EBL5_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05112.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae
NECEvent2014_4_4_scaffold_806_9
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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5227..5526
DNA (300bp) protein (100aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N7M2_SLAHD
type IV secretory pathway, VirD4 component
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:ACV22907.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia he
Displaying 9 items

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