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NECEvent2014_4_4_scaffold_12

Alias: 174_004_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_12_1
unknown

Not on your lists

27..173
DNA (147bp) protein (49aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_12_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(136..1155)
DNA (1020bp) protein (340aa)
Homocysteine S-methyltransferase n=1 Tax=Veillonella atypica KON RepID=L1Q1N7_9FIRM rbh
Homocysteine S-methyltransferase {ECO:0000313|EMBL:EKY21625.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica
homocysteine S-methyltransferase
NECEvent2014_4_4_scaffold_12_3
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1164..1988)
DNA (825bp) protein (275aa)
NMT1/THI5-like protein n=1 Tax=Veillonella sp. ACP1 RepID=J4QBY4_9FIRM rbh
NMT1/THI5-like protein {ECO:0000313|EMBL:EJO49224.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
family 3 extracellular solute-binding protein
NECEvent2014_4_4_scaffold_12_4
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2227..4164)
DNA (1938bp) protein (646aa)
Oligopeptide transporter, OPT family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE23_9FIRM rbh
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EFR59966.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
oligopeptide transporter OPT family
NECEvent2014_4_4_scaffold_12_5
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4405..5628
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1203593 spec
Peptidase T n=1 Tax=Veillonella sp. HPA0037 RepID=S3ASN5_9FIRM rbh
peptidase T
NECEvent2014_4_4_scaffold_12_6
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5725..7014)
DNA (1290bp) protein (430aa)
UPI0003D61C00 related cluster n=1 Tax=unknown RepID=UPI0003D61C00 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ETJ14936.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
major facilitator superfamily protein
NECEvent2014_4_4_scaffold_12_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7240..7860)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=E1L763_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL58083.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V
hypothetical protein
NECEvent2014_4_4_scaffold_12_8
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7948..8886)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LBD2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL58089.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V
hypothetical protein
NECEvent2014_4_4_scaffold_12_9
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9013..9729)
DNA (717bp) protein (239aa)
DNA-binding helix-turn-helix protein n=2 Tax=Veillonella RepID=J5ALM6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD79308.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
NECEvent2014_4_4_scaffold_12_10
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9889..10440)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=J4JFN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79309.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
NECEvent2014_4_4_scaffold_12_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10449..11405)
DNA (957bp) protein (319aa)
UPF0365 protein VEIDISOL_01894 n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FSK4_9FIRM rbh
UPF0365 protein VEIDISOL_01894 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar
hypothetical protein
NECEvent2014_4_4_scaffold_12_12
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11435..11896)
DNA (462bp) protein (154aa)
Nodulation efficiency protein NfeD n=1 Tax=Veillonella sp. ACP1 RepID=J5AF93_9FIRM
Nodulation efficiency protein NfeD {ECO:0000313|EMBL:EUB24553.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. IC
hypothetical protein
NECEvent2014_4_4_scaffold_12_13
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12062..13345)
DNA (1284bp) protein (428aa)
Putative permease n=3 Tax=Veillonella atypica RepID=E1L757_9FIRM rbh
Putative permease {ECO:0000313|EMBL:EFL58098.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a
uracil-xanthine permease
NECEvent2014_4_4_scaffold_12_14
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13379..14707)
DNA (1329bp) protein (443aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LBC6_9FIRM rbh
Putative stage V sporulation protein E {ECO:0000313|EMBL:EUB24623.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp
cell cycle protein
NECEvent2014_4_4_scaffold_12_15
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14709..15368)
DNA (660bp) protein (220aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZSD1_9FIRM rbh
tRNA (guanine-N(7)-)-methyltransferase
NECEvent2014_4_4_scaffold_12_16
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15516..16208)
DNA (693bp) protein (231aa)
Uncharacterized protein n=3 Tax=Veillonella atypica RepID=E1L754_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB24595.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
NECEvent2014_4_4_scaffold_12_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(16561..16791)
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=11 Tax=Veillonella RepID=D1BR59_VEIPT
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (st
NECEvent2014_4_4_scaffold_12_18
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16831..17229)
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=3 Tax=Veillonella RepID=J4QBY6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=936588 species="Bacteria; Firmicutes; Negativi
single-strand binding protein
NECEvent2014_4_4_scaffold_12_19
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17251..17535)
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=5 Tax=Veillonella RepID=E1L751_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;
30S ribosomal protein S6
NECEvent2014_4_4_scaffold_12_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17652..18827)
DNA (1176bp) protein (392aa)
Beta-lactamase domain protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BR55_VEIPT rbh
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACZ24018.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (st
NECEvent2014_4_4_scaffold_12_21
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18830..19819)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6H2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB24575.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
NECEvent2014_4_4_scaffold_12_22
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20164..21393
DNA (1230bp) protein (410aa)
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:EFR59770.1}; EC=2.6.1.83 {ECO:0000313|EMBL:EFR59770.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellace
LL-diaminopimelate aminotransferase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE46_9FIRM rbh
class I and II aminotransferase
NECEvent2014_4_4_scaffold_12_23
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21498..23720)
DNA (2223bp) protein (741aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L6H0_9FIRM rbh
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EFL56060.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="
outer membrane autotransporter barrel domain-containing protein
NECEvent2014_4_4_scaffold_12_24
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23996..24967
DNA (972bp) protein (324aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EFR60016.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EFR60016.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Ve
Diaminopimelate dehydrogenase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LE47_9FIRM rbh
diaminopimelate dehydrogenase
NECEvent2014_4_4_scaffold_12_25
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25159..26265
DNA (1107bp) protein (369aa)
Ribosome-binding ATPase YchF n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KL78_9FIRM rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
GTP-binding protein YchF
NECEvent2014_4_4_scaffold_12_26
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26368..26571)
DNA (204bp) protein (68aa)
CsbD-like protein n=4 Tax=Veillonella RepID=L1Q117_9FIRM
CsbD-like protein {ECO:0000313|EMBL:EFL58613.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a
hypothetical protein
NECEvent2014_4_4_scaffold_12_27
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26637..26876)
DNA (240bp) protein (80aa)
Transglycosylase associated protein n=2 Tax=Veillonella RepID=J4QBM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79328.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
transglycosylase
NECEvent2014_4_4_scaffold_12_28
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27029..27739)
DNA (711bp) protein (237aa)
Nitroreductase family protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1L9V2_9FIRM rbh
Nitroreductase family protein {ECO:0000313|EMBL:EFL58643.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS
nitroreductase
NECEvent2014_4_4_scaffold_12_29
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27866..28123)
DNA (258bp) protein (86aa)
PF11823 family protein n=1 Tax=Veillonella sp. ACP1 RepID=J5AL23_9FIRM
PF11823 family protein {ECO:0000313|EMBL:EJO49143.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_4_4_scaffold_12_30
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28175..28774)
DNA (600bp) protein (200aa)
Selenium metabolism protein YedF n=1 Tax=Veillonella sp. ACP1 RepID=J5AKQ3_9FIRM rbh
Selenium metabolism protein YedF {ECO:0000313|EMBL:EJO49053.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1
SirA family protein
Displaying items 1-30 of 265 in total

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