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NECEvent2014_4_4_scaffold_25_26

Organism: NECEvent2014_4_4_Clostridium_butyricum_28_46

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(23646..24140)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=3 Tax=Clostridium butyricum RepID=B1QZL5_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 332
  • Evalue 1.80e-88
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEP53287.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 332
  • Evalue 2.50e-88
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 163.0
  • Bit_score: 254
  • Evalue 2.30e-65

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCTGATATTTCATTGCGTACGGATGAAATTATCTCACGTGATTTAGATGATTATGGCGATATGATTTTAAGACTTGCATATTCATATATGAAAAATATTCATGATGCTGAAGATATATTGCAAGATGTATTTGTGCAGCTTATGAAAAATATTGATATATTTCAAGGTGATAATCATAAGAAGTCGTGGCTTATTACAGTAACAAGAAATATGTGTAAAAATAAACTTAAATCATCATGGTTTAAAAGTAGAGAAGAATTGATAGAACTTCCATATTACGATGAATACAAGAATGATGATATTATTGAAGCTGTGATGAAATTACCCTTAAAGTATAGAGAAGTTATACATTTATTTTATTATGAAGATTATTCAACAGCACAGATAGCTGAAATAGTTAATAAGAAGGAATCAACCATTCGTTCATTATTACATAGAGGAAGAAATATCCTAAAAAAAATGCTTAAGGAGGGATATGATTTTGAAGAATAG
PROTEIN sequence
Length: 165
MADISLRTDEIISRDLDDYGDMILRLAYSYMKNIHDAEDILQDVFVQLMKNIDIFQGDNHKKSWLITVTRNMCKNKLKSSWFKSREELIELPYYDEYKNDDIIEAVMKLPLKYREVIHLFYYEDYSTAQIAEIVNKKESTIRSLLHRGRNILKKMLKEGYDFEE*