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NECEvent2014_4_4_scaffold_25

Alias: 174_004_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_25_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76..1563)
DNA (1488bp) protein (496aa)
Phytoene dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMW1_CLOBU rbh
Phytoene dehydrogenase {ECO:0000313|EMBL:ETI89474.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
phytoene desaturase
NECEvent2014_4_4_scaffold_25_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1598..2113)
DNA (516bp) protein (172aa)
Chromate transport protein n=3 Tax=Clostridium butyricum RepID=B1QZJ2_CLOBU rbh
Putative chromate transport protein {ECO:0000313|EMBL:EEP53464.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E
chromate transporter
NECEvent2014_4_4_scaffold_25_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2115..2648)
DNA (534bp) protein (178aa)
Chromate transport protein n=2 Tax=Clostridium butyricum RepID=B1QZJ3_CLOBU rbh
Chromate transport protein {ECO:0000313|EMBL:EEP54962.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. Bo
chromate transport protein
NECEvent2014_4_4_scaffold_25_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2815..4359)
DNA (1545bp) protein (515aa)
Surface protein PspC n=2 Tax=Clostridium butyricum RepID=B1QZJ4_CLOBU rbh
Choline binding protein A {ECO:0000313|EMBL:KJZ89052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
leucine rich repeat protein
NECEvent2014_4_4_scaffold_25_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4469..5836)
DNA (1368bp) protein (456aa)
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:KJZ89026.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KJZ89026.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
accC1: biotin carboxylase 1 (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3C0_CLOBU rbh
NECEvent2014_4_4_scaffold_25_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5879..6337)
DNA (459bp) protein (153aa)
Biotin carboxyl carrier protein of acetyl-coa carboxylase n=2 Tax=Clostridium butyricum RepID=B1QZJ6_CLOBU
Biotin carboxyl carrier protein {ECO:0000313|EMBL:KJZ89150.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
biotin/lipoyl attachment domain-containing protein
NECEvent2014_4_4_scaffold_25_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6353..7354)
DNA (1002bp) protein (334aa)
Allophanate hydrolase 2 subunit 2 {ECO:0000313|EMBL:KJZ89133.1}; EC=3.5.1.54 {ECO:0000313|EMBL:KJZ89133.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
KipA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI48_CLOBU rbh
kipA; KipI antagonist
NECEvent2014_4_4_scaffold_25_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7351..8058)
DNA (708bp) protein (236aa)
Allophanate hydrolase 2 subunit 1 {ECO:0000313|EMBL:KJZ89059.1}; EC=3.5.1.54 {ECO:0000313|EMBL:KJZ89059.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7P4_CLOBU rbh
allophanate hydrolase subunit 1
NECEvent2014_4_4_scaffold_25_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8080..9201)
DNA (1122bp) protein (374aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1523155 species="Bacteria; Firmic
alr1; alanine racemase Alr (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z112_CLOBU rbh
NECEvent2014_4_4_scaffold_25_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9331..10098)
DNA (768bp) protein (256aa)
UPF0271 protein CBY_3848 n=2 Tax=Clostridium butyricum RepID=B1QZJ9_CLOBU rbh
UPF0271 protein CLP_1044 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
LamB/YcsF family protein
NECEvent2014_4_4_scaffold_25_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10137..10922)
DNA (786bp) protein (262aa)
UPF0317 protein CBDKU1_22650 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3C6_CLOBU rbh
UPF0317 protein ClosIBUN22A_CONTIG3g00074 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_4_4_scaffold_25_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10935..12038)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGL0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP54131.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_4_scaffold_25_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12053..12916)
DNA (864bp) protein (288aa)
D-amino-acid transaminase {ECO:0000313|EMBL:EEP54642.1}; EC=2.6.1.21 {ECO:0000313|EMBL:EEP54642.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
D-amino-acid transaminase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI55_CLOBU rbh
D-amino acid aminotransferase
NECEvent2014_4_4_scaffold_25_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13199..13636)
DNA (438bp) protein (146aa)
Transcriptional regulator, AsnC family n=3 Tax=Clostridium butyricum RepID=B1QZK3_CLOBU
Regulatory protein, AsnC/Lrp {ECO:0000313|EMBL:KJZ89053.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator
NECEvent2014_4_4_scaffold_25_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13819..14211)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBK8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89056.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14213..14644)
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium butyricum RepID=B1QZK5_CLOBU
MarR family transcriptional regulator {ECO:0000313|EMBL:KHD15972.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
MarR family transcriptional regulator
NECEvent2014_4_4_scaffold_25_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14866..16053)
DNA (1188bp) protein (396aa)
Biosynthetic Aromatic amino acid aminotransferase alpha/Aspartate aminotransferase {ECO:0000313|EMBL:KJZ89036.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KJZ89036.1};; EC=2.6.1.57 {ECO:0000313|EMBL:KJZ89036.1};;
putative aspartate aminotransferase (EC:2.6.1.1)
Pyridoxal-phosphate-dependent aminotransferase family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGL6_CLOBU rbh
NECEvent2014_4_4_scaffold_25_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16147..17466)
DNA (1320bp) protein (440aa)
Transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI63_CLOBU rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
sodium-dependent amino acid transporter(proline, tryptophan)
NECEvent2014_4_4_scaffold_25_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17554..17658)
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI89491.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_4_4_scaffold_25_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17686..17856)
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QZK8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33622.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18109..19065
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AB53_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33623.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19085..20200
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K3D8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33624.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein rbh
NECEvent2014_4_4_scaffold_25_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20322..20744)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1R5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33625.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20982..22433)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum 60E.3 RepID=N9Z132_CLOBU rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ETI89496.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum D
hypothetical protein
NECEvent2014_4_4_scaffold_25_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22607..23662)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANE9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33627.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23646..24140)
DNA (495bp) protein (165aa)
RNA polymerase sigma-70 factor n=3 Tax=Clostridium butyricum RepID=B1QZL5_CLOBU rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEP53287.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ECF subfamily RNA polymerase sigma-24 factor
NECEvent2014_4_4_scaffold_25_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24360..24836)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALI8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33629.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative iron-dependent repressor
NECEvent2014_4_4_scaffold_25_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24975..25229
DNA (255bp) protein (85aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QZL7_CLOBU
Ferrous iron transporter A {ECO:0000313|EMBL:ENZ33630.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_4_scaffold_25_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25256..27403
DNA (2148bp) protein (716aa)
Ferrous iron transporter B n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z141_CLOBU rbh
Ferrous iron transporter B {ECO:0000313|EMBL:ENZ33631.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferrous iron transport protein B
NECEvent2014_4_4_scaffold_25_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27484..29259)
DNA (1776bp) protein (592aa)
rnjA3; ribonuclease J 1 (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANF4_CLOBU rbh
RNA-metabolising metallo-beta-lactamase family protein {ECO:0000313|EMBL:ETI90880.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
Displaying items 1-30 of 106 in total

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