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NECEvent2014_4_4_scaffold_70

Alias: 174_004_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_70_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149..865)
DNA (717bp) protein (239aa)
Glycerophosphoryl diester phosphodiesterase family protein n=2 Tax=Clostridium perfringens RepID=Q0TP81_CLOP1 rbh
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:EDT22538.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_4_scaffold_70_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(869..1891)
DNA (1023bp) protein (341aa)
FMN-dependent dehydrogenase n=2 Tax=Clostridium perfringens RepID=Q0TP80_CLOP1 rbh
FMN-dependent dehydrogenase
FMN-dependent dehydrogenase {ECO:0000313|EMBL:EDT22542.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
NECEvent2014_4_4_scaffold_70_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1905..2348)
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CXS3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22547.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_4_scaffold_70_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2586..4769)
DNA (2184bp) protein (728aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL22_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EDT71101.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str
spoVD; stage V sporulation protein D
NECEvent2014_4_4_scaffold_70_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5032..7392)
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=883064 species="Bacteria; Firmi
Endonuclease MutS2 n=2 Tax=Clostridium perfringens RepID=H7CXS5_CLOPF rbh
recombination and DNA strand exchange inhibitor protein
NECEvent2014_4_4_scaffold_70_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7406..9757)
DNA (2352bp) protein (784aa)
Peptidase, U32 family n=2 Tax=Clostridium perfringens RepID=Q0TP76_CLOP1 rbh
U32 family peptidase
Peptidase, U32 family {ECO:0000313|EMBL:EDT25825.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F496
NECEvent2014_4_4_scaffold_70_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10156..10944
DNA (789bp) protein (263aa)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSL7_CLOPF rbh
Putative histidinol-phosphatase {ECO:0000313|EMBL:EDT71091.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D s
histidinol-phosphatase
NECEvent2014_4_4_scaffold_70_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11193..12548)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXS8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16733.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_70_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12629..15010)
DNA (2382bp) protein (794aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIX6_CLOPF rbh
NECEvent2014_4_4_scaffold_70_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15034..16053)
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Clostridium perfringens RepID=SYFA_CLOP1 rbh
NECEvent2014_4_4_scaffold_70_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16665..17438)
DNA (774bp) protein (258aa)
RNA methyltransferase, TrmH family n=4 Tax=Clostridium perfringens RepID=B1RB42_CLOPF rbh
TrmH family RNA methyltransferase
Probable rRNA methylase {ECO:0000313|EMBL:BAB81595.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_70_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17464..18129)
DNA (666bp) protein (222aa)
Probable potassium uptake system protein n=10 Tax=Clostridium perfringens RepID=Q8XJ71_CLOPE rbh
potassium uptake protein
Putative potassium uptake protein {ECO:0000313|EMBL:EIA16737.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
NECEvent2014_4_4_scaffold_70_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18152..19492)
DNA (1341bp) protein (447aa)
TrkH family potassium uptake protein n=5 Tax=Clostridium perfringens RepID=H7CXT3_CLOPF rbh
TrkH family potassium uptake protein
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDT25839.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_4_4_scaffold_70_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19721..20080)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_4_4_scaffold_70_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20110..20307)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=9 Tax=Clostridium perfringens RepID=RL35_CLOP1
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_4_4_scaffold_70_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20329..20850)
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=5 Tax=Clostridium perfringens RepID=H7CXT6_CLOPF rbh
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
infC; translation initiation factor IF-3
NECEvent2014_4_4_scaffold_70_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21131..22009)
DNA (879bp) protein (293aa)
Putative sporulation protein YtxC n=3 Tax=Clostridium perfringens RepID=B1BIW8_CLOPF rbh
Putative sporulation protein YtxC {ECO:0000313|EMBL:EDS80228.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
sporulation protein YtxC
NECEvent2014_4_4_scaffold_70_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22144..22839
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R328_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT25255.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_4_scaffold_70_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23094..24074
DNA (981bp) protein (327aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=5 Tax=Clostridium perfringens RepID=B1BIW6_CLOPF rbh
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EDT13318.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
BadF/BadG/BcrA/BcrD ATPase
NECEvent2014_4_4_scaffold_70_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24203..24757)
DNA (555bp) protein (185aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXU0_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16745.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_70_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24922..25476)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RL40_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16746.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_70_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25775..26152
DNA (378bp) protein (126aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXU2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16747.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_70_trna_4
unknown

Not on your lists

comp(26265..26336)
DNA (72bp)
transferRNA
NECEvent2014_4_4_scaffold_70_trna_3
unknown

Not on your lists

comp(26345..26415)
DNA (71bp)
transferRNA
NECEvent2014_4_4_scaffold_70_trna_2
unknown

Not on your lists

comp(26422..26493)
DNA (72bp)
transferRNA
NECEvent2014_4_4_scaffold_70_trna_1
unknown

Not on your lists

comp(26502..26574)
DNA (73bp)
transferRNA
NECEvent2014_4_4_scaffold_70_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26635..27594)
DNA (960bp) protein (320aa)
33 kDa chaperonin n=9 Tax=Clostridium perfringens RepID=HSLO_CLOP1 rbh
hslO; Hsp33-like chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=883064 species="Bacteria; Firmicutes; Clostri
NECEvent2014_4_4_scaffold_70_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27610..28332)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CX35_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16749.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_70_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28399..28671)
DNA (273bp) protein (91aa)
Small acid-soluble spore protein beta n=10 Tax=Clostridium perfringens RepID=H7CX36_CLOPF
beta type small acid-soluble spore protein
Small acid-soluble spore protein beta {ECO:0000313|EMBL:EIA16750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_4_4_scaffold_70_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28873..29850
DNA (978bp) protein (326aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CX37_CLOPF rbh
Displaying items 1-30 of 63 in total

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