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NECEvent2014_4_4_scaffold_82

Alias: 174_004_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_82_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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196..1746
DNA (1551bp) protein (517aa)
Nitrite/sulfite reductase-like protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSY3_CLOPF rbh
Nitrite/sulfite reductase-like protein {ECO:0000313|EMBL:EIA18277.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
nitrite/sulfite reductase-like protein
NECEvent2014_4_4_scaffold_82_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2059..2874
DNA (816bp) protein (272aa)
speD; S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00465}; Short=AdoMetDC {ECO:0000255|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000255|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000
S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Clostridium perfringens RepID=SPED_CLOP1 rbh
NECEvent2014_4_4_scaffold_82_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2892..4346
DNA (1455bp) protein (485aa)
Orn/Lys/Arg decarboxylase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V252_CLOPF rbh
Orn/Lys/Arg decarboxylase {ECO:0000313|EMBL:EDT72157.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JG
Orn/Lys/Arg decarboxylase
NECEvent2014_4_4_scaffold_82_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4361..5212
DNA (852bp) protein (284aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=3 Tax=Clostridium perfringens RepID=SPEE_CLOP1 rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=45
NECEvent2014_4_4_scaffold_82_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5199..6056
DNA (858bp) protein (286aa)
speB; agmatinase (EC:3.5.3.11)
Agmatinase {ECO:0000313|EMBL:EDT25032.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EDT25032.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Agmatinase n=4 Tax=Clostridium perfringens RepID=H7CSY7_CLOPF rbh
NECEvent2014_4_4_scaffold_82_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6370..6633)
DNA (264bp) protein (88aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CSY8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80981.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
NECEvent2014_4_4_scaffold_82_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6842..10363
DNA (3522bp) protein (1174aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTR6_CLOPF rbh
Putative exo-alpha-sialidase {ECO:0000313|EMBL:EDT25063.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
nanJ; exo-alpha-sialidase
NECEvent2014_4_4_scaffold_82_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10510..11145
DNA (636bp) protein (212aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=B1BND3_CLOPF rbh
Conserved domain protein {ECO:0000313|EMBL:EDT16697.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
hypothetical protein
NECEvent2014_4_4_scaffold_82_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11258..13927)
DNA (2670bp) protein (890aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EDT16620.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EDT16620.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTR4_CLOPF rbh
copper-translocating P-type ATPase
NECEvent2014_4_4_scaffold_82_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14219..14875
DNA (657bp) protein (219aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Clostridium perfringens F262 RepID=H7CSZ2_CLOPF rbh
flavodoxin family protein
NECEvent2014_4_4_scaffold_82_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16179..17315
DNA (1137bp) protein (379aa)
Glycine betaine/L-proline transport, ATP-binding protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSZ4_CLOPF rbh
Glycine betaine/L-proline transport, ATP-binding protein {ECO:0000313|EMBL:EIA18288.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
glycine betaine/L-proline transport, ATP-binding protein
NECEvent2014_4_4_scaffold_82_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17308..18861
DNA (1554bp) protein (518aa)
Glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTP8_CLOP1 rbh
glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein
Glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein {ECO:0000313|EMBL:ABG87678.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
NECEvent2014_4_4_scaffold_82_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19075..19695
DNA (621bp) protein (207aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX9_CLOPE rbh
sigV; RNA polymerase sigma-70 factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80265.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_4_4_scaffold_82_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19688..20779
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RNK2_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86909.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_4_4_scaffold_82_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21127..22548
DNA (1422bp) protein (474aa)
PTS system n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX7_CLOPE rbh
PTS system transporter
PTS system {ECO:0000313|EMBL:BAB80267.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
NECEvent2014_4_4_scaffold_82_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22752..24419
DNA (1668bp) protein (556aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDT26177.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDT26177.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIN9_CLOPF rbh
NECEvent2014_4_4_scaffold_82_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24686..25393
DNA (708bp) protein (236aa)
Trehalose operon repressor n=2 Tax=Clostridium perfringens RepID=B1BWM3_CLOPF rbh
treR; transcriptional regulator
Trehalose operon repressor {ECO:0000313|EMBL:EDT13916.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
NECEvent2014_4_4_scaffold_82_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25845..28010)
DNA (2166bp) protein (722aa)
Stage V sporulation protein D n=3 Tax=Clostridium perfringens RepID=H7CT02_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EIA18296.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
spoVD; stage V sporulation protein D
NECEvent2014_4_4_scaffold_82_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28377..29045
DNA (669bp) protein (223aa)
Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX3_CLOPE rbh
N-acetylmuramoyl-L-alanine amidase
Probable N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:BAB80271.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_4_scaffold_82_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29635..30717
DNA (1083bp) protein (361aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium perfringens F262 RepID=H7CT04_CLOPF rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_4_scaffold_82_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30739..31392
DNA (654bp) protein (218aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EDT23811.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EDT23811.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7G4_CLOPF rbh
NECEvent2014_4_4_scaffold_82_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31545..32744
DNA (1200bp) protein (400aa)
ribA; riboflavin biosynthesis protein RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium perfringens F262 RepID=H7CT06_CLOPF rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_4_4_scaffold_82_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32850..33332
DNA (483bp) protein (161aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH24_CLOPF rbh
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
ribH; 6,7-dimethyl-8-ribityllumazine synthase
NECEvent2014_4_4_scaffold_82_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33459..34331)
DNA (873bp) protein (291aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6P4_CLOPF rbh
Cell wall binding repeat domain protein {ECO:0000313|EMBL:EDT70514.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
hypothetical protein
NECEvent2014_4_4_scaffold_82_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34435..34842)
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18302.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_82_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35241..35489
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CT10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13925.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_4_scaffold_82_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35781..37985
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7D9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT23822.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_4_scaffold_82_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38170..39921
DNA (1752bp) protein (584aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNI5_CLOPF rbh
Sensor histidine kinase {ECO:0000313|EMBL:EIA18306.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
sensor histidine kinase
NECEvent2014_4_4_scaffold_82_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39934..41523
DNA (1590bp) protein (530aa)
Two-component response regulator n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMW3_CLOPE rbh
Two-component response regulator {ECO:0000313|EMBL:BAB80281.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
AraC family transcriptional regulator
NECEvent2014_4_4_scaffold_82_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41676..43061
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF rbh
ABC transporter
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS81063.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
Displaying items 1-30 of 46 in total

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