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NECEvent2014_4_4_scaffold_84

Alias: 174_004_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_84_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

130..240
DNA (111bp) protein (37aa)
HesB family protein n=4 Tax=Clostridium perfringens RepID=Q0SV82_CLOPS
HesB-related selenoprotein
HesB family protein {ECO:0000313|EMBL:ABG87712.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
NECEvent2014_4_4_scaffold_84_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

748..2058
DNA (1311bp) protein (437aa)
F5/8 type C domain protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTB1_CLOPF rbh
F5/8 type C domain protein {ECO:0000313|EMBL:EIA17913.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
F5/8 type C domain-containing protein
NECEvent2014_4_4_scaffold_84_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2380..3180
DNA (801bp) protein (267aa)
TPR domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGT1_CLOPF rbh
TPR domain protein {ECO:0000313|EMBL:EDT26840.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;
hypothetical protein
NECEvent2014_4_4_scaffold_84_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3305..4153)
DNA (849bp) protein (283aa)
Putative L-xylulose 5-phosphate 3-epimerase n=3 Tax=Clostridium perfringens RepID=H7CTA9_CLOPF rbh
L-xylulose 5-phosphate 3-epimerase
Putative hexulose-6-phosphate isomerase {ECO:0000313|EMBL:EDT24115.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_4_scaffold_84_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4172..4870)
DNA (699bp) protein (233aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EIA17910.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EIA17910.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
L-ribulose-5-phosphate 4-epimerase n=6 Tax=Clostridium perfringens RepID=H7CTA8_CLOPF rbh
NECEvent2014_4_4_scaffold_84_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5009..6043)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQS8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16455.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_4_scaffold_84_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6151..6441)
DNA (291bp) protein (97aa)
Putative PTS system, ascorbate-specific IIB component SgaB n=8 Tax=Clostridium perfringens RepID=H7CTA6_CLOPF
PTS system, ascorbate-specific IIB component SgaB
Putative PTS system, ascorbate-specific IIB component SgaB {ECO:0000313|EMBL:EDT16524.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_4_scaffold_84_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6538..8004)
DNA (1467bp) protein (489aa)
PTS system ascorbate-specific transporter subunit IIC n=6 Tax=Clostridium perfringens RepID=H7CTA5_CLOPF rbh
PTS system ascorbate-specific transporter subunit IIC
Putative PTS system, ascorbate-specific IIC component SgaT {ECO:0000313|EMBL:EDT26812.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_4_scaffold_84_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8189..8623)
DNA (435bp) protein (145aa)
Putative PTS system, ascorbate-specific IIA component SgaA n=1 Tax=Clostridium perfringens F262 RepID=H7CTA4_CLOPF
Putative PTS system, ascorbate-specific IIA component SgaA {ECO:0000313|EMBL:EIA17906.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system, ascorbate-specific IIA component SgaA
NECEvent2014_4_4_scaffold_84_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8648..9748)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=B1R6N4_CLOPF rbh
L-ascorbate 6-phosphate lactonase
Putative L-ascorbate 6-phosphate lactonase {ECO:0000313|EMBL:EIA17905.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_4_4_scaffold_84_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10158..10937
DNA (780bp) protein (260aa)
DeoR family transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CTA2_CLOPF rbh
DeoR family transcriptional regulator {ECO:0000313|EMBL:EIA17904.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
DeoR family transcriptional regulator
NECEvent2014_4_4_scaffold_84_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11116..11937)
DNA (822bp) protein (274aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTA1_CLOPF rbh
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:EIA17903.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
NECEvent2014_4_4_scaffold_84_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11946..13439)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGS1_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT26844.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_84_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13788..15179)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZG8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT73117.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
hypothetical protein
NECEvent2014_4_4_scaffold_84_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15336..16673)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGR9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT26847.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_84_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16687..17802)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQU4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16541.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_4_scaffold_84_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17920..18705)
DNA (786bp) protein (262aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CT95_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA17897.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_84_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19014..19805)
DNA (792bp) protein (264aa)
RelA/spoT family protein n=8 Tax=Clostridium perfringens RepID=H7CT94_CLOPF rbh
relA/spoT family protein
RelA/spoT family protein {ECO:0000313|EMBL:EDT26800.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
NECEvent2014_4_4_scaffold_84_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19924..20616)
DNA (693bp) protein (231aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGR5_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EIA17895.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
Ser/Thr protein phosphatase family protein
NECEvent2014_4_4_scaffold_84_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21035..22255)
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=5 Tax=Clostridium perfringens RepID=H7CT92_CLOPF rbh
NECEvent2014_4_4_scaffold_84_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22551..22964)
DNA (414bp) protein (138aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CT91_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17893.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_84_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23040..24173)
DNA (1134bp) protein (378aa)
AAA domain family protein n=4 Tax=Clostridium perfringens RepID=B1BL86_CLOPF rbh
AAA domain family protein {ECO:0000313|EMBL:EDT16401.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
ATPase AAA
NECEvent2014_4_4_scaffold_84_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24367..25491)
DNA (1125bp) protein (375aa)
Spore germination protein n=8 Tax=Clostridium perfringens RepID=H7CT89_CLOPF rbh
spore germination protein
Spore germination protein {ECO:0000313|EMBL:EIA17891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_84_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25466..26887)
DNA (1422bp) protein (474aa)
Spore germination protein n=6 Tax=Clostridium perfringens RepID=Q0TTF8_CLOP1 rbh
spore germination protein
Spore germination protein KA {ECO:0000313|EMBL:BAB80354.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_4_4_scaffold_84_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26983..28071
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMP1_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80353.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_84_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28226..28381
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT86_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26824.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_4_scaffold_84_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28634..30292
DNA (1659bp) protein (553aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18) rbh
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=4 Tax=Clostridium perfringens RepID=SYQ_CLOP1 rbh
NECEvent2014_4_4_scaffold_84_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30705..31121
DNA (417bp) protein (139aa)
Flavodoxin n=2 Tax=Clostridium perfringens RepID=H7CT84_CLOPF
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EIA17886.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_84_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31155..31778
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RBT9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT22294.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_4_scaffold_84_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31949..32644)
DNA (696bp) protein (232aa)
Two-component response regulator n=2 Tax=Clostridium perfringens RepID=Q8XMP6_CLOPE rbh
DNA-binding response regulator rbh
Two-component response regulator {ECO:0000313|EMBL:BAB80348.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (s
Displaying items 1-30 of 51 in total

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