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NECEvent2014_4_4_scaffold_118

Alias: 174_004_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_118_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47..286
DNA (240bp) protein (80aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVB4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25964.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_4_scaffold_118_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

477..1265
DNA (789bp) protein (263aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRH5_CLOPF rbh
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDT71009.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
hypothetical protein
NECEvent2014_4_4_scaffold_118_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1449..2273
DNA (825bp) protein (275aa)
hisK; histidinol-phosphatase (EC:3.1.3.15)
Histidinol-phosphatase {ECO:0000313|EMBL:EDT71011.1}; EC=3.1.3.15 {ECO:0000313|EMBL:EDT71011.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Histidinol-phosphatase n=3 Tax=Clostridium perfringens RepID=Q0STV7_CLOPS rbh
NECEvent2014_4_4_scaffold_118_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2399..3844)
DNA (1446bp) protein (482aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF40_CLOPF rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS81554.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C
hypothetical protein
NECEvent2014_4_4_scaffold_118_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4204..6111)
DNA (1908bp) protein (636aa)
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:EDT13386.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EDT13386.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
nadE; NAD synthetase (EC:6.3.1.5)
Glutamine-dependent NAD(+) synthetase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V596_CLOPF rbh
NECEvent2014_4_4_scaffold_118_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6425..6838
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CVB9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17237.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_118_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6858..7808
DNA (951bp) protein (317aa)
SPFH domain-containing protein/band 7 family protein n=9 Tax=Clostridium perfringens RepID=H7CVC0_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80766.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_118_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7988..9040
DNA (1053bp) protein (351aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=883064 species="Bacteria; Firmicu
Alanine racemase n=3 Tax=Clostridium perfringens RepID=H7CVC1_CLOPF rbh
NECEvent2014_4_4_scaffold_118_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9271..10305
DNA (1035bp) protein (345aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Clostridium perfringens F262 RepID=H7CVC2_CLOPF rbh
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
rnfG; RnfABCDGE type electron transport complex subunit G
NECEvent2014_4_4_scaffold_118_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10323..10991
DNA (669bp) protein (223aa)
Electron transport complex RsxE subunit n=4 Tax=Clostridium perfringens RepID=H7CVC3_CLOPF rbh
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
rnfE; electron transport complex protein RsxE
NECEvent2014_4_4_scaffold_118_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11020..11595
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=7 Tax=Clostridium perfringens RepID=H7CVC4_CLOPF rbh
rnfA; RnfABCDGE type electron transport complex subunit A
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_4_4_scaffold_118_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11612..12433
DNA (822bp) protein (274aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5A3_CLOPF rbh
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDT71024.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost
rnfB; ferredoxin
NECEvent2014_4_4_scaffold_118_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12497..12997
DNA (501bp) protein (167aa)
Cytidine/deoxycytidylate deaminase family protein n=7 Tax=Clostridium perfringens RepID=H7CVC6_CLOPF rbh
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:EDS81566.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
cytidine/deoxycytidylate deaminase
NECEvent2014_4_4_scaffold_118_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13168..13632
DNA (465bp) protein (155aa)
MarR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVC7_CLOPF
MarR family transcriptional regulator {ECO:0000313|EMBL:EIA17245.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
MarR family transcriptional regulator
NECEvent2014_4_4_scaffold_118_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13634..14608
DNA (975bp) protein (325aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Clostridium perfringens RepID=FABH_CLOPE rbh
NECEvent2014_4_4_scaffold_118_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14705..15649
DNA (945bp) protein (315aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Clostridium perfringens RepID=Q0TRG9_CLOP1 rbh
NECEvent2014_4_4_scaffold_118_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15653..16393
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EDT71029.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDT71029.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=2 Tax=Clostridium perfringens RepID=B1RRG1_CLOPF rbh
NECEvent2014_4_4_scaffold_118_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16408..17649
DNA (1242bp) protein (414aa)
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Clostridium perfringens RepID=Q0TRG7_CLOP1 rbh
NECEvent2014_4_4_scaffold_118_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17661..18152
DNA (492bp) protein (164aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=6 Tax=Clostridium perfringens RepID=H7CVD2_CLOPF rbh
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EIA17250.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
NECEvent2014_4_4_scaffold_118_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18155..18574
DNA (420bp) protein (140aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=10 Tax=Clostridium perfringens RepID=FABZ_CLOP1
NECEvent2014_4_4_scaffold_118_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18586..19938
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDT71013.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EDT71013.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
accC; biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase n=3 Tax=Clostridium perfringens RepID=B1RRF7_CLOPF rbh
NECEvent2014_4_4_scaffold_118_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19931..20809
DNA (879bp) protein (293aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=6 Tax=Clostridium perfringens RepID=ACCD_CLOP1 rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
NECEvent2014_4_4_scaffold_118_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20802..21617
DNA (816bp) protein (272aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=3 Tax=Clostridium perfringens RepID=ACCA_CLOP1 rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
NECEvent2014_4_4_scaffold_118_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21716..22105)
DNA (390bp) protein (130aa)
PadR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVD7_CLOPF
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT25508.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_4_scaffold_118_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22525..23343)
DNA (819bp) protein (273aa)
AP endonuclease n=1 Tax=Clostridium perfringens F262 RepID=H7CVD9_CLOPF rbh
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
AP endonuclease
NECEvent2014_4_4_scaffold_118_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23560..24270
DNA (711bp) protein (237aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=2 Tax=Clostridium perfringens RepID=B1RJS2_CLOPF rbh
rluB; ribosomal small subunit pseudouridine synthase B
NECEvent2014_4_4_scaffold_118_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24276..24827
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RC41_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22201.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_4_scaffold_118_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24859..25734
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CVE2_CLOPF rbh
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS81329.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_4_4_scaffold_118_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25951..27171
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BFU6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS81347.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_4_4_scaffold_118_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27293..27946
DNA (654bp) protein (218aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=9 Tax=Clostridium perfringens RepID=KCY_CLOP1 rbh
Displaying items 1-30 of 44 in total

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