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NECEvent2014_4_4_scaffold_183

Alias: 174_004_scaffold_183

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_183_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1717)
DNA (1716bp) protein (572aa)
von Willebrand factor type A/Cna B-type domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT15_CLOP1 rbh
von Willebrand factor A
von Willebrand factor type A/Cna B-type domain-containing protein {ECO:0000313|EMBL:EIA18031.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_4_4_scaffold_183_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1867..2730)
DNA (864bp) protein (288aa)
Sortase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT16_CLOP1 rbh
sortase
Sortase family protein {ECO:0000313|EMBL:EDT16412.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS19
NECEvent2014_4_4_scaffold_183_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2706..3578)
DNA (873bp) protein (291aa)
Sortase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT17_CLOP1 rbh
sortase
Sortase family protein {ECO:0000313|EMBL:EIA18029.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_183_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3668..5317)
DNA (1650bp) protein (550aa)
Cell wall surface anchor family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT18_CLOP1 rbh
cell wall surface anchor family protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:EIA18028.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_4_scaffold_183_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5727..7016)
DNA (1290bp) protein (430aa)
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EDS79468.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDS79468.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Aspartyl-tRNA synthetase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT19_CLOP1 rbh
NECEvent2014_4_4_scaffold_183_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7197..7976)
DNA (780bp) protein (260aa)
Hydrolase, alpha/beta fold family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT20_CLOP1 rbh
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EDT16519.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_4_4_scaffold_183_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8390..9769
DNA (1380bp) protein (460aa)
Putative citrate transporter n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI16_CLOPF rbh
Putative citrate transporter {ECO:0000313|EMBL:EDT26425.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE st
hypothetical protein
NECEvent2014_4_4_scaffold_183_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10120..11559)
DNA (1440bp) protein (480aa)
Iron-sulfur cluster-binding protein, rieske family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI17_CLOPF rbh
Iron-sulfur cluster-binding protein, rieske family {ECO:0000313|EMBL:EDT26434.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
Rieske family iron-sulfur cluster-binding protein
NECEvent2014_4_4_scaffold_183_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11986..15015)
DNA (3030bp) protein (1010aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
beta-galactosidase (EC:3.2.1.23)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNT2_CLOPF rbh
NECEvent2014_4_4_scaffold_183_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15380..16219
DNA (840bp) protein (280aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CTM0_CLOPF rbh
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80476.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_4_scaffold_183_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16442..17806)
DNA (1365bp) protein (455aa)
Sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein n=4 Tax=Clostridium perfringens RepID=H7CTL9_CLOPF rbh
sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein
Sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein {ECO:0000313|EMBL:EIA18021.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
NECEvent2014_4_4_scaffold_183_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18160..18654
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1RCA4_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22139.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_4_scaffold_183_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18712..18867)
DNA (156bp) protein (52aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTL7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18019.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_183_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19175..20530
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BP08_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT26384.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_183_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20695..21498)
DNA (804bp) protein (268aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI66_CLOPF rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDT26366.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
MerR family transcriptional regulator
NECEvent2014_4_4_scaffold_183_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21650..22279
DNA (630bp) protein (210aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BP10_CLOPF rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT16397.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E st
hypothetical protein
NECEvent2014_4_4_scaffold_183_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22497..23450)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTL3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA18015.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_183_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23676..24368
DNA (693bp) protein (231aa)
HAD superfamily (Subfamily IA) hydrolase n=5 Tax=Clostridium perfringens RepID=H7CTL2_CLOPF rbh
HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:EIA18014.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
HAD-superfamily hydrolase
NECEvent2014_4_4_scaffold_183_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25046..26311
DNA (1266bp) protein (422aa)
Proton/sodium-glutamate symporter n=2 Tax=Clostridium perfringens RepID=H7CTL0_CLOPF rbh
Proton/sodium-glutamate symporter {ECO:0000313|EMBL:EIA18012.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
proton/sodium-glutamate symport protein
NECEvent2014_4_4_scaffold_183_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26631..27311)
DNA (681bp) protein (227aa)
MviM protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ62_CLOPF rbh
MviM protein {ECO:0000313|EMBL:EDT73041.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
oxidoreductase domain-containing protein
Displaying 20 items

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